Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05241 ATGGGTTCTACAAATCAAGAAGAAGTGAGACTATTAGGAAAATGGGCAAGTCCATTTAGCAACAGGATAGATCTTGCTTTGAAACTCAAAGGTGTTCCATACAAATACTCTGAGGAAAATTTACCTATTAAAAGTGAAGATCTTCTCAAGTACAACCCTGTTTACAAGAAGGTACCTGTTCTTGTTCATAATGGAAATCCAATTGCTGAGTCACTTATCATTCTTGAATATATTGATGAGACATGGACAAATAATTCTCTTTTGTCTCAAGATCCTTATGAGAGAGCTTTGGCTCGTTTTTGGGCTAAGACTCTAGATGACAAGATCTTGCCTGCAATATGGAATGCATGCCGGGGTGCTGAAAAAGGAAGTGACAAAGCTGTGGAAGAAGCCTTTGAAGCTCTAAAGCTACTAGAAGATGAAATCAAAGACAAGAGATTCTTTGGTGGAGAAACCATAGGACTTGTTGATATTGCTGCAAGTTTCATTGGTTATTGGGTTGATATATTACAAGAAATTGCTGGATTAGAGTTACTTACTATTGAGAAATTTCCAAAGGTATTTAAATGGAGTCAAGAATTTATCAATCATCCTGTTATCAAAGAAGGATTGCCTCCAAGAGATGAACTATTTGCTTTTTTCAATGCTTCTGCTCCAAAATAG 663 0.3635 MGSTNQEEVRLLGKWASPFSNRIDLALKLKGVPYKYSEENLPIKSEDLLKYNPVYKKVPVLVHNGNPIAESLIILEYIDETWTNNSLLSQDPYERALARFWAKTLDDKILPAIWNACRGAEKGSDKAVEEAFEALKLLEDEIKDKRFFGGETIGLVDIAASFIGYWVDILQEIAGLELLTIEKFPKVFKWSQEFINHPVIKEGLPPRDELFAFFNASAPK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05241 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 210 IPR045073 -
Vifa2g05241 220 CDD GST_C_Tau 92 216 IPR045074 GO:0004364|GO:0006749
Vifa2g05241 220 SUPERFAMILY GST C-terminal domain-like 80 216 IPR036282 -
Vifa2g05241 220 SFLD Main.3: Omega- and Tau-like 5 217 IPR045073 -
Vifa2g05241 220 Gene3D - 88 220 - -
Vifa2g05241 220 Gene3D Glutaredoxin 3 87 - -
Vifa2g05241 220 CDD GST_N_Tau 9 82 - -
Vifa2g05241 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Vifa2g05241 220 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Vifa2g05241 220 Pfam Glutathione S-transferase, C-terminal domain 101 198 IPR004046 -
Vifa2g05241 220 SFLD Glutathione Transferase (cytosolic) 5 217 IPR040079 -
Vifa2g05241 220 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Vifa2g05241 220 FunFam Tau class glutathione S-transferase 3 90 - -
Vifa2g05241 220 FunFam Tau class glutathione S-transferase 88 220 - -
Vifa2g05241 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 214 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05241 Vifa-Chr2 1561368941 1561370370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05241 5 216 Glutathione S-transferase Gene Family AT3G09270 57.674 2.09e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05241 K00799 - gmx:547582 375.941