Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05240 ATGGCTGAAGTTCAATTGTTGGGTGTAAGAGGAAGCCCATTTGTCCAAAGAGTGCAATATGCTCTAAGACTAAAGGGCATTGAGTACAGTTTCATTGAAGATAATCTAAGAAACAAAAGTGAACTTCTTCTTAAGTATAATCCTATTCATAAGAAGGTGCCTGTTTTTGTTCACAATGGAAAACCATTATCTGAGTCACTTGTGATCATTGAATACATTGATGAAACTTGGGGGAATTATCACATTTTTCCTCAACATGGTTATGAGAAAGCCTTAGCTAGATTTTGGTCCAAGTTCATCGATGACAAGATCTTGCCTCCAATATTCAAGGCAGCATGGACAGTGAACAAAGAGGAACGAGAGAAAAACACTGAAGAAGCATTGCAGGGTCTACAATTTCTTGAAAATGAACTCAAGAACAAATTCTTTGGTGGAGAAAACATTGGCATTGTGGACATTGCTGCTTCCTACTTAGCTTTCTGGCTTCCTGCTGTGGAAGAAGCTGTTGGACTGAAGTTGCTTAGTGGTGACAAATTTCCTAAGCTCCTTAAATGGAGTCAAGAGTTCATCAATCAACCTATTGTGAAAGAGATTCTTCCTTCTAGAGAAGGACTACTAGGGTTTTTCAAATCTCGATATGCTGCGATTAGTGCTTCTGCAAAATAG 666 0.3859 MAEVQLLGVRGSPFVQRVQYALRLKGIEYSFIEDNLRNKSELLLKYNPIHKKVPVFVHNGKPLSESLVIIEYIDETWGNYHIFPQHGYEKALARFWSKFIDDKILPPIFKAAWTVNKEEREKNTEEALQGLQFLENELKNKFFGGENIGIVDIAASYLAFWLPAVEEAVGLKLLSGDKFPKLLKWSQEFINQPIVKEILPSREGLLGFFKSRYAAISASAK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05240 221 CDD GST_C_Tau 88 212 IPR045074 GO:0004364|GO:0006749
Vifa2g05240 221 FunFam Tau class glutathione S-transferase 1 85 - -
Vifa2g05240 221 Coils Coil 117 137 - -
Vifa2g05240 221 Pfam Glutathione S-transferase, C-terminal domain 105 193 IPR004046 -
Vifa2g05240 221 CDD GST_N_Tau 4 77 - -
Vifa2g05240 221 Gene3D Glutaredoxin 1 85 - -
Vifa2g05240 221 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Vifa2g05240 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 213 IPR010987 -
Vifa2g05240 221 Gene3D - 86 220 - -
Vifa2g05240 221 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Vifa2g05240 221 FunFam Tau class glutathione S-transferase 83 219 - -
Vifa2g05240 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vifa2g05240 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 203 IPR045073 -
Vifa2g05240 221 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Vifa2g05240 221 SUPERFAMILY GST C-terminal domain-like 75 213 IPR036282 -
Vifa2g05240 221 SFLD Main (cytGST) 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05240 Vifa-Chr2 1561257618 1561258634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05240 4 219 Glutathione S-transferase Gene Family AT3G09270 48.858 4.14e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05240 K00799 - gmx:100819805 317.39