Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05233 ATGATGAGGATGAAGAAGAAAATGACTATGCATATGAGTCTCTATTGGGGAAAAGATGCTATAGTACTTTTCCCTGGGTGGCCTAATGAAAGTGTTGGCATGTATATTTTAGCTTTCTGTTTTGTGTTTTTCCTTGCTTTGGTTGTTGAGTTTTTGCCCAACAAACCCACCATCAAGCAAGGGACAAATCACATAAAGGGAGGGTTGATTCAAGCTGCTATTTACTTTTTTCGTATCAGTTTCCTTTACTTGGTTATGCTTGCTGTTATGTCTTTCAATATAGGAATCTTTATTGCTGCTGTTGCTGGTCATACTTTGGGATTCTTTCTAGTTAAGTCTCATGCTATTTCTGCTGCCAACAAAGAACAAAAGCATGAACCCGCCGTGAGTATTGATGAAATTTAG 405 0.3802 MMRMKKKMTMHMSLYWGKDAIVLFPGWPNESVGMYILAFCFVFFLALVVEFLPNKPTIKQGTNHIKGGLIQAAIYFFRISFLYLVMLAVMSFNIGIFIAAVAGHTLGFFLVKSHAISAANKEQKHEPAVSIDEI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05233 134 Pfam Ctr copper transporter family 12 52 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa2g05233 134 Pfam Ctr copper transporter family 60 110 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa2g05233 134 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 2 123 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05233 Vifa-Chr2 1559257668 1559258072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05233 13 124 Inorganic Solute Cotransporters AT5G59030 46.087 2.18e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05233 K14686 - gmx:100808693 175.252