Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05218 ATGGATTTCTGGCCAGAGTTTCTTGCAAGTAGTTCAGGTAGAGAGTTTGTGGCAGGTGGATTTGGAGGCATTGCTGGTGTGATTTCTGGTTATCCTTTGGATACTCTTAGAATCAGACAACAGAGTTCAAAGAATAATGGTTCTGCTTTTGGAATCCTTAGGAAAATGGTGGCTAGAGAAGGAGCAGGTTCTTTGTACCGTGGCATGGCTGCACCATTGGCATCAGTGACTTTTCAGAATGCAATAGTTTTTCAAACATATGCAAGTCTATCAAGAGCATTTGATCCATCTGATTCAGCTAAAGACCCTCCGTCGTACAAAAGTGTGGCATTAGGCGGAATCGGCACAGGCGGACTTCAAAGTTTATTACTATCACCAGTAGAGCTCATCAAAATTCGACTTCAGTTGCAAAACACAAATCAATCAAAAGAATCAACAACAACAACAAGTCCTATAAAAGTAGCTAAAAACATATGGAGAAAAGAGGGTCTCCGCGGCATATATCGAGGACTCGGCATAACAGTTGTCGAACAAGCAGTAAAGAAAGTCCTGAATACTATGTTGGTGTCGGGAGGATCAGCGGGCGTAGCAAGCTGGGTTTGCTGCTATCCTTTTGATGTTGTGAAAACAAGACTACAGGGACAAACACTGTCTGCAATCAAATACAAAGGAATTTACGATTGCTTCGCGAAAAGCGTTAAAGAAGAAGGTTATCAGGTCTTGTGGCGCGGTTTAGGAACCGCGGAAACACTTTAG 756 0.4272 MDFWPEFLASSSGREFVAGGFGGIAGVISGYPLDTLRIRQQSSKNNGSAFGILRKMVAREGAGSLYRGMAAPLASVTFQNAIVFQTYASLSRAFDPSDSAKDPPSYKSVALGGIGTGGLQSLLLSPVELIKIRLQLQNTNQSKESTTTTSPIKVAKNIWRKEGLRGIYRGLGITVVEQAVKKVLNTMLVSGGSAGVASWVCCYPFDVVKTRLQGQTLSAIKYKGIYDCFAKSVKEEGYQVLWRGLGTAETL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05218 251 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 247 - -
Vifa2g05218 251 Gene3D Mitochondrial carrier domain 12 248 IPR023395 -
Vifa2g05218 251 SUPERFAMILY Mitochondrial carrier 14 247 IPR023395 -
Vifa2g05218 251 ProSiteProfiles Solute carrier (Solcar) repeat profile. 185 251 IPR018108 -
Vifa2g05218 251 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 93 IPR018108 -
Vifa2g05218 251 Pfam Mitochondrial carrier protein 12 94 IPR018108 -
Vifa2g05218 251 Pfam Mitochondrial carrier protein 188 247 IPR018108 -
Vifa2g05218 251 Pfam Mitochondrial carrier protein 105 187 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05218 Vifa-Chr2 1551672278 1551674503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05218 16 99 Antiporters AT1G79900 35.227 2.09e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05218 K15109 - gmx:100812056 361.688