Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05215 ATGATCACTCTCTTAGGTGCCCACAACATTGGTGTAATCGACTGCAAATTCTTCAAGAACCGTCTCTATAACTTCATCGGAACCAATGAACCTGACCCTTCTTTGGATACTGAATTTCTAAATAACAACAGGAAATCACTATGGACTCGGAGAAATCTGTATCGAATTTCGGGATGTTATACTACCGCAGTCTGTTGCAAGGGTAAAGGAATCCTCTATGCTGATCAGCAGCTAATGGAAGGGGATAAAACCAAGTATTGGGTTCACAAATATGCATCTAATCCTAATTTGTTCCATCAAGATTTTGCCATGGCAATGATGAAACTCTCGGATCTCCAAGTTTTGACAATGCCTTTGGGACAGATTCGACGCACTTGTTCAAAAGTTGCATGA 393 0.4071 MITLLGAHNIGVIDCKFFKNRLYNFIGTNEPDPSLDTEFLNNNRKSLWTRRNLYRISGCYTTAVCCKGKGILYADQQLMEGDKTKYWVHKYASNPNLFHQDFAMAMMKLSDLQVLTMPLGQIRRTCSKVA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05215 130 Gene3D - 110 129 - -
Vifa2g05215 130 Gene3D Peroxidase, domain 2 67 109 - -
Vifa2g05215 130 Gene3D Peroxidase, domain 2 1 57 - -
Vifa2g05215 130 ProSiteProfiles Plant heme peroxidase family profile. 1 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05215 130 PANTHER - 1 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05215 130 Pfam Peroxidase 1 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05215 130 SUPERFAMILY Heme-dependent peroxidases 1 129 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05215 Vifa-Chr2 1551373313 1551373796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05215 2 128 Peroxidase AT4G33870 36.047 2.27e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05215 K00430 - mnt:21408860 134.42