Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g05205 | ATGTCTACTACTGATACTACTGCTAATCCAAAGGGGAAGAAGAGCTACGATCTCTACTTGAGTTTCTGCGGTGTTCACGACGATGTTCCTTTTGTTTTGAAATTCCGTGAGGCTCTTTCTTCCTATGTTCCAGAAGCTCTTATTTTCTTTGACTTTGTCAAGCTTCGACATATTGGTCGGGTAACCGTAACCGCGCCTTCAGAGTTATCTCTTAATGTAATTCAAGACTGCAAAATGGTCATAATCATACTTTCAAGAAATTATACTAATTCACAATCGTGTCTTCAAGAACTCGAGTTCATAACCCAGTGTTGCCTAACTACACCTGCTCTTATTGTTCTGCCTGTCTTGTATCCCATCGAGCCAAGTTTGCAAATAGGTATATTTGGACGGCCTTTTCACAACTTTCTCGATAGAGTTTCGATCAAAGAAATCTTCCAAGGTGAAGACAAGATCATGACTTTGGTGGAAGCTATGAGTAAATCTACCCAATATCCAACCGATTTCGCACCCACCGACGGGGACGAGTATGATTGTGTCAAGAGTGTAGTTGATCGTGTTATTTCTGTGATATACAAAAAAAGACCAGAATTGTCAAGGACTTTCTATACACCTAGTGTAAAATCTAGTGTGCAAGATGTGATTCAACTGTTGAAACAATCAAAATCTCCTCTCGTAATAGGGATTTGGGGGATAGCAGGAATTGGTAAAACAACCATTGCCAAAACCATTTATGATCTGATTGGTCCCTATTTTGAGGGCAAGTGCATGCTCCTTAATGTTGGTGGAGTTTGGGGACGAAATAACGGTCCAGTTTCTTTACAGGAAGAGCTTCTTTTTCATGTCAACAAAGCCACTGGATTTGAAAAAGTGACTTTAAAAAGAAACCTTCGAAATAAAAGGGTACTTGTTATACTTGAAGATGTTAATAAATTGGAGCAGCTAAATGCGTTGTGTGGAAGTCGTAACTGGTTTGGTGCAGGTAGCAAAATAATCATCACGACAAGAGATAGACGTTTACTCAAGGAGTATGGAGTTGACCATATATATAGAGTGAAAGAACTGGATGAAAGTGAATCGCTTGATGTTTTCAAGTGGGGTGCATTCGGCAAAGAAACAAGTCCAGAAAATTTTGATGAACTTTCCAGACAGGTAGTTGCTTATTCTGGGGGATGGCCTCTTGCTCTTATAGCCCTTGGGAGGCTTTTGCATGGAAAGGAAGCCCTTCAGTGGGAAGGTGTGTTATGGAGTCTCAAAAATTTTTCTATTCCGGCTCCACGACTACTGAATATTCTAGAAAAGAGTTTTAATGAGTTGAGTGATAACGAGAAACAGACATTCCTGGATATAGCAAGTTTCTTTATTGGGAAGAACCAAAATGATGTACTCCAAACGTTAAATAGGTCAACGCAAAGGGCGGCTTTTCAAATAAGCCTTCTTGAAGACAAGAGCCTTGTTGCCATCGATGAGAATAACAAGCTTGAAATGCATATTCTCCTACAAGCCATGGCCAGAGATATCATTAAAAGAGAATCAAGCAGTAGGACTAATCAGGCCAAGATGTACGACGTGTTCTTGAGTTTCAGAGGGGAAGACAGTCGTGCAAAGTTCATGTCACATCTCTATTCTTCTCTTCAAAATGCAGAGTTGGAAAGGATCATGGAAATTAGCAGAGCCAGGGGACTGGATGTTGTGCCAGTGTTCTATGAGGTAGATCCCGCTGAAGTACGTCATCAGGAAGGTCAGTTTGGGAAAGCTTTTGAAGAACTTAGATCAACAACCTCAGTGAATGAATCCACAAAGACTAACTGGAGAAGAGACCTTTTTGATATTGGTAGCAAAGCAGGGTTTGTACTCAAAGATTCCAGGAATGAAAGTGGAGATGTCAAGAATATTGTTGAAAGTGTCTCCCGTTTGCTAGATAGGACAGAGTTATTTGTTGCTGAACATCAAGTAGGTGTAGAATCCCGTGTGGAAGCAGCAACTAAACTACTAGATATCCAAAAATCAGAAGATGTTTTAGTTCTTGGGATATGGGGAATGGGGGGCATGGGTAAAACAACCATTGCAAAAGCAATATATAATCAAATTGGAAGCAAGTTTGAGGGAAAGAGCTTCCTTCTGAATATAAGGGAAATTTGGGAGACAAACAATCAAGTTTCTTTACAGCAACAAGTACTCGGTGATATTTACAAAACAATGACATTCAAGATACGTGACATCGAATCTGGGAAAATTATCTTGAAGGAAAGACTTTCCCAAAATAGGATACTTTTTGTACTTGATGATGTGAATGAAGTAGACCAACTAAATGCTTTGTGTGGAAGTCGTGAATGGTTTGGTCCGGGGAGTAGAATAATTATCACAACAAGAGATTTGCATATTCTTAATTCGTGTAGAGTTGATCAAGTGCATAGAATAGAAGAAATGGACGGAAATGAATCTCTTGAGCTTTTTTGTTGGCATGCATTCAAGCAATCAAGACCGACAAAAGATTTTGCTAGACATTCAACAGATGTGATTGCTTATTCCGGGGGATTGCCACTAGCACTTCAAGTCCTTGGGTCATATTTGTCTGACTGTGAAATACCAGTGTGGCAGAAAGTTTTGGAAAAACTAAAATGTATTCCCCATAATCAAGTACATAAGAAGCTAAAAGTAAGTTTTGATGGTTTAAAAGATATCACAGAGAAACAAGCATTCCTTGATATAGCTTGTTTTTTTATTGGAATGGACCGAAATGATGTAACACAAATATTAAACGGGTGTGGATTTTTTGCTGATATTGGAATTAAAGTTCTTATTGAGCGAAGTCTTGTAACTGTTGACAATAGGAACAAGCTTCAAATGCATGATTTGTTGAGAGACATGGGAAGACAAATAATTTATGAGGAATCACCATTTGATCTTGAGAAGCGCAGTAGGTTGTGGCGTCCTGAAGAAGTGTTTGACATACTATCAAAGTATACGGGAACAAAAGCTGTCAAGGGACTGGCTTTAGAGTTTCCAAAAACAAACAAAGTTTGTCTAGATACCAAAGCATTTAAGAAGATGAATAAACTCAGATTACTTCAACTTGCTCGGAAAGGAAGTTTAGTTGCTATGGAGTTAAAATATAGTAATCTCAAATATTCATGGAATTGGAGCCAAAAGATGTTAGAGAATCTAAAGTTTCTTAATCTTAGTCATTCTCTGGAGTTGACTGAAACCCCAAACTTTGATTACATGCCTAATTTGGAAAAGATAGTACTAAAAGACTGTCCAAGTTTATCTTCCGTCTCTTATACCATTGGAGATCTCGATAAACTTCTTCTTATAAACTTGTCAAACTGCACAGGTCTTGGGACACTTCCGAGAAGCATCTATGGTTTAAAGTCTCTAGAAACCTTTATTCTTTCTGGATGTTCCTTGATCGACAAATTGGAGGAGGATTTGGAATGTATGAAATCCTTGACAACCTTAATTGTGGATAAGACTGCTATAACAAAAGTGTCCTTTTCAATAGTAAGATCTAAAAGCATTAAATATATTTCTTTACCTGGCTTTGAAGGATTTTCACGAGATGTATTTCCTTCTCTCATTCGATCTTGGATGTCACCATCAAATAATGTGATATCCCTGGTTCAAACATTTGCGCCCGTGTCATCTCTTGGTCTTTGTATGAAATGTGACTCAAAACCACAACTGTCTCAAGATGTAGCAAGAATTTTGGATGCATTGAAAGCCACAAATTGTCAGAAACTGGAACCAAGTGCAACTTCAACTCCTTCTCGTTTGATTAACGATTACATTGCTCAAGCTTCCACTTCAAAGTCTAATAATTTCTTGAAATCTTTCTTGATTCAAATGGGAATGAAACTCCAATCCACCAATATTGCCCAAGACAACATTTTACAGACTGCGGATGGAATTTGGGATCCAATTTTGCTCCCATGTTACAATATATCTGATTGGTCAACCATCAGTAGTAAAGGTTGTTCTATAATATTTGATGTCCCAACAATGAAGGGGAGTAACCTGAAGAATATGACGTTGTTCCTTGTCTATTACTCTTCCTCGGACAACATAGCATCAGAAGGTTGTCAAGGTGTGTTGATCATAAATTACACAAAGACAACCATTCAGGCATATACAAAAGATGCACTTACCTCCTTTGAGGATGAAGATTGGAAGAGCATAACATCAAATCTAGAATCTGGTAACAAAGTAGAAGTTGTGGTTGTTTTGGGGGATGGATTCATTGTTGAGAAGACTACAGTATATCTCTTATATGATGAACCAATCGACAAAGAAATGGAACACTGCAATGCAATAGGCAAGGAGAGTGTTATTGCTTTTAGTCATGAGGATAAGAATGTTGGTGTTTCTGATGGTGATAATATTCATGTCCCGATGGACCACATTATTACTGGTTCAGAGCAAGATGAAGCTTTAAGTGATGATAAGCATGGGCAGGCAATGAGTAGAAAAAGAAAGTCAGATTATTCTAATGGGATACACTACAATGCCTAA | 4512 | 0.3825 | MSTTDTTANPKGKKSYDLYLSFCGVHDDVPFVLKFREALSSYVPEALIFFDFVKLRHIGRVTVTAPSELSLNVIQDCKMVIIILSRNYTNSQSCLQELEFITQCCLTTPALIVLPVLYPIEPSLQIGIFGRPFHNFLDRVSIKEIFQGEDKIMTLVEAMSKSTQYPTDFAPTDGDEYDCVKSVVDRVISVIYKKRPELSRTFYTPSVKSSVQDVIQLLKQSKSPLVIGIWGIAGIGKTTIAKTIYDLIGPYFEGKCMLLNVGGVWGRNNGPVSLQEELLFHVNKATGFEKVTLKRNLRNKRVLVILEDVNKLEQLNALCGSRNWFGAGSKIIITTRDRRLLKEYGVDHIYRVKELDESESLDVFKWGAFGKETSPENFDELSRQVVAYSGGWPLALIALGRLLHGKEALQWEGVLWSLKNFSIPAPRLLNILEKSFNELSDNEKQTFLDIASFFIGKNQNDVLQTLNRSTQRAAFQISLLEDKSLVAIDENNKLEMHILLQAMARDIIKRESSSRTNQAKMYDVFLSFRGEDSRAKFMSHLYSSLQNAELERIMEISRARGLDVVPVFYEVDPAEVRHQEGQFGKAFEELRSTTSVNESTKTNWRRDLFDIGSKAGFVLKDSRNESGDVKNIVESVSRLLDRTELFVAEHQVGVESRVEAATKLLDIQKSEDVLVLGIWGMGGMGKTTIAKAIYNQIGSKFEGKSFLLNIREIWETNNQVSLQQQVLGDIYKTMTFKIRDIESGKIILKERLSQNRILFVLDDVNEVDQLNALCGSREWFGPGSRIIITTRDLHILNSCRVDQVHRIEEMDGNESLELFCWHAFKQSRPTKDFARHSTDVIAYSGGLPLALQVLGSYLSDCEIPVWQKVLEKLKCIPHNQVHKKLKVSFDGLKDITEKQAFLDIACFFIGMDRNDVTQILNGCGFFADIGIKVLIERSLVTVDNRNKLQMHDLLRDMGRQIIYEESPFDLEKRSRLWRPEEVFDILSKYTGTKAVKGLALEFPKTNKVCLDTKAFKKMNKLRLLQLARKGSLVAMELKYSNLKYSWNWSQKMLENLKFLNLSHSLELTETPNFDYMPNLEKIVLKDCPSLSSVSYTIGDLDKLLLINLSNCTGLGTLPRSIYGLKSLETFILSGCSLIDKLEEDLECMKSLTTLIVDKTAITKVSFSIVRSKSIKYISLPGFEGFSRDVFPSLIRSWMSPSNNVISLVQTFAPVSSLGLCMKCDSKPQLSQDVARILDALKATNCQKLEPSATSTPSRLINDYIAQASTSKSNNFLKSFLIQMGMKLQSTNIAQDNILQTADGIWDPILLPCYNISDWSTISSKGCSIIFDVPTMKGSNLKNMTLFLVYYSSSDNIASEGCQGVLIINYTKTTIQAYTKDALTSFEDEDWKSITSNLESGNKVEVVVVLGDGFIVEKTTVYLLYDEPIDKEMEHCNAIGKESVIAFSHEDKNVGVSDGDNIHVPMDHIITGSEQDEALSDDKHGQAMSRKRKSDYSNGIHYNA | 1503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g05205 | 1503 | SMART | till_3 | 521 | 614 | IPR000157 | GO:0007165 | |
Vifa2g05205 | 1503 | SMART | till_3 | 15 | 162 | IPR000157 | GO:0007165 | |
Vifa2g05205 | 1503 | Pfam | TIR domain | 16 | 137 | IPR000157 | GO:0007165 | |
Vifa2g05205 | 1503 | Pfam | TIR domain | 549 | 637 | IPR000157 | GO:0007165 | |
Vifa2g05205 | 1503 | MobiDBLite | consensus disorder prediction | 1471 | 1503 | - | - | |
Vifa2g05205 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 639 | 904 | IPR027417 | - | |
Vifa2g05205 | 1503 | Pfam | NB-ARC domain | 209 | 422 | IPR002182 | GO:0043531 | |
Vifa2g05205 | 1503 | Pfam | NB-ARC domain | 655 | 879 | IPR002182 | GO:0043531 | |
Vifa2g05205 | 1503 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 13 | 143 | IPR035897 | - | |
Vifa2g05205 | 1503 | Gene3D | Ribonuclease Inhibitor | 985 | 1220 | IPR032675 | - | |
Vifa2g05205 | 1503 | SUPERFAMILY | L domain-like | 949 | 1194 | - | - | |
Vifa2g05205 | 1503 | MobiDBLite | consensus disorder prediction | 1473 | 1496 | - | - | |
Vifa2g05205 | 1503 | Gene3D | - | 11 | 192 | IPR035897 | - | |
Vifa2g05205 | 1503 | SUPERFAMILY | "Winged helix" DNA-binding domain | 428 | 512 | IPR036390 | - | |
Vifa2g05205 | 1503 | ProSiteProfiles | TIR domain profile. | 14 | 167 | IPR000157 | GO:0007165 | |
Vifa2g05205 | 1503 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 522 | 1254 | IPR044974 | GO:0006952 | |
Vifa2g05205 | 1503 | Gene3D | - | 354 | 440 | IPR042197 | - | |
Vifa2g05205 | 1503 | Gene3D | - | 810 | 893 | IPR042197 | - | |
Vifa2g05205 | 1503 | Gene3D | - | 550 | 637 | IPR035897 | - | |
Vifa2g05205 | 1503 | PRINTS | Disease resistance protein signature | 751 | 765 | - | - | |
Vifa2g05205 | 1503 | PRINTS | Disease resistance protein signature | 675 | 690 | - | - | |
Vifa2g05205 | 1503 | PRINTS | Disease resistance protein signature | 844 | 858 | - | - | |
Vifa2g05205 | 1503 | PRINTS | Disease resistance protein signature | 1098 | 1114 | - | - | |
Vifa2g05205 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 210 | 450 | IPR027417 | - | |
Vifa2g05205 | 1503 | Gene3D | - | 193 | 348 | IPR027417 | - | |
Vifa2g05205 | 1503 | Gene3D | - | 638 | 806 | IPR027417 | - | |
Vifa2g05205 | 1503 | Gene3D | - | 488 | 549 | IPR035897 | - | |
Vifa2g05205 | 1503 | SMART | AAA_5 | 672 | 811 | IPR003593 | GO:0016887 | |
Vifa2g05205 | 1503 | SMART | AAA_5 | 223 | 355 | IPR003593 | GO:0016887 | |
Vifa2g05205 | 1503 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 512 | 615 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g05205 | Vifa-Chr2 | 1549852797 | 1549864171 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g05205 | 71 | 515 | WRKY Transcription Factor Family | AT4G12020 | 30.044 | 3.30e-40 | 161 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g05205 | - | - | mtr:11411578 | 1822.75 |