Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05205 ATGTCTACTACTGATACTACTGCTAATCCAAAGGGGAAGAAGAGCTACGATCTCTACTTGAGTTTCTGCGGTGTTCACGACGATGTTCCTTTTGTTTTGAAATTCCGTGAGGCTCTTTCTTCCTATGTTCCAGAAGCTCTTATTTTCTTTGACTTTGTCAAGCTTCGACATATTGGTCGGGTAACCGTAACCGCGCCTTCAGAGTTATCTCTTAATGTAATTCAAGACTGCAAAATGGTCATAATCATACTTTCAAGAAATTATACTAATTCACAATCGTGTCTTCAAGAACTCGAGTTCATAACCCAGTGTTGCCTAACTACACCTGCTCTTATTGTTCTGCCTGTCTTGTATCCCATCGAGCCAAGTTTGCAAATAGGTATATTTGGACGGCCTTTTCACAACTTTCTCGATAGAGTTTCGATCAAAGAAATCTTCCAAGGTGAAGACAAGATCATGACTTTGGTGGAAGCTATGAGTAAATCTACCCAATATCCAACCGATTTCGCACCCACCGACGGGGACGAGTATGATTGTGTCAAGAGTGTAGTTGATCGTGTTATTTCTGTGATATACAAAAAAAGACCAGAATTGTCAAGGACTTTCTATACACCTAGTGTAAAATCTAGTGTGCAAGATGTGATTCAACTGTTGAAACAATCAAAATCTCCTCTCGTAATAGGGATTTGGGGGATAGCAGGAATTGGTAAAACAACCATTGCCAAAACCATTTATGATCTGATTGGTCCCTATTTTGAGGGCAAGTGCATGCTCCTTAATGTTGGTGGAGTTTGGGGACGAAATAACGGTCCAGTTTCTTTACAGGAAGAGCTTCTTTTTCATGTCAACAAAGCCACTGGATTTGAAAAAGTGACTTTAAAAAGAAACCTTCGAAATAAAAGGGTACTTGTTATACTTGAAGATGTTAATAAATTGGAGCAGCTAAATGCGTTGTGTGGAAGTCGTAACTGGTTTGGTGCAGGTAGCAAAATAATCATCACGACAAGAGATAGACGTTTACTCAAGGAGTATGGAGTTGACCATATATATAGAGTGAAAGAACTGGATGAAAGTGAATCGCTTGATGTTTTCAAGTGGGGTGCATTCGGCAAAGAAACAAGTCCAGAAAATTTTGATGAACTTTCCAGACAGGTAGTTGCTTATTCTGGGGGATGGCCTCTTGCTCTTATAGCCCTTGGGAGGCTTTTGCATGGAAAGGAAGCCCTTCAGTGGGAAGGTGTGTTATGGAGTCTCAAAAATTTTTCTATTCCGGCTCCACGACTACTGAATATTCTAGAAAAGAGTTTTAATGAGTTGAGTGATAACGAGAAACAGACATTCCTGGATATAGCAAGTTTCTTTATTGGGAAGAACCAAAATGATGTACTCCAAACGTTAAATAGGTCAACGCAAAGGGCGGCTTTTCAAATAAGCCTTCTTGAAGACAAGAGCCTTGTTGCCATCGATGAGAATAACAAGCTTGAAATGCATATTCTCCTACAAGCCATGGCCAGAGATATCATTAAAAGAGAATCAAGCAGTAGGACTAATCAGGCCAAGATGTACGACGTGTTCTTGAGTTTCAGAGGGGAAGACAGTCGTGCAAAGTTCATGTCACATCTCTATTCTTCTCTTCAAAATGCAGAGTTGGAAAGGATCATGGAAATTAGCAGAGCCAGGGGACTGGATGTTGTGCCAGTGTTCTATGAGGTAGATCCCGCTGAAGTACGTCATCAGGAAGGTCAGTTTGGGAAAGCTTTTGAAGAACTTAGATCAACAACCTCAGTGAATGAATCCACAAAGACTAACTGGAGAAGAGACCTTTTTGATATTGGTAGCAAAGCAGGGTTTGTACTCAAAGATTCCAGGAATGAAAGTGGAGATGTCAAGAATATTGTTGAAAGTGTCTCCCGTTTGCTAGATAGGACAGAGTTATTTGTTGCTGAACATCAAGTAGGTGTAGAATCCCGTGTGGAAGCAGCAACTAAACTACTAGATATCCAAAAATCAGAAGATGTTTTAGTTCTTGGGATATGGGGAATGGGGGGCATGGGTAAAACAACCATTGCAAAAGCAATATATAATCAAATTGGAAGCAAGTTTGAGGGAAAGAGCTTCCTTCTGAATATAAGGGAAATTTGGGAGACAAACAATCAAGTTTCTTTACAGCAACAAGTACTCGGTGATATTTACAAAACAATGACATTCAAGATACGTGACATCGAATCTGGGAAAATTATCTTGAAGGAAAGACTTTCCCAAAATAGGATACTTTTTGTACTTGATGATGTGAATGAAGTAGACCAACTAAATGCTTTGTGTGGAAGTCGTGAATGGTTTGGTCCGGGGAGTAGAATAATTATCACAACAAGAGATTTGCATATTCTTAATTCGTGTAGAGTTGATCAAGTGCATAGAATAGAAGAAATGGACGGAAATGAATCTCTTGAGCTTTTTTGTTGGCATGCATTCAAGCAATCAAGACCGACAAAAGATTTTGCTAGACATTCAACAGATGTGATTGCTTATTCCGGGGGATTGCCACTAGCACTTCAAGTCCTTGGGTCATATTTGTCTGACTGTGAAATACCAGTGTGGCAGAAAGTTTTGGAAAAACTAAAATGTATTCCCCATAATCAAGTACATAAGAAGCTAAAAGTAAGTTTTGATGGTTTAAAAGATATCACAGAGAAACAAGCATTCCTTGATATAGCTTGTTTTTTTATTGGAATGGACCGAAATGATGTAACACAAATATTAAACGGGTGTGGATTTTTTGCTGATATTGGAATTAAAGTTCTTATTGAGCGAAGTCTTGTAACTGTTGACAATAGGAACAAGCTTCAAATGCATGATTTGTTGAGAGACATGGGAAGACAAATAATTTATGAGGAATCACCATTTGATCTTGAGAAGCGCAGTAGGTTGTGGCGTCCTGAAGAAGTGTTTGACATACTATCAAAGTATACGGGAACAAAAGCTGTCAAGGGACTGGCTTTAGAGTTTCCAAAAACAAACAAAGTTTGTCTAGATACCAAAGCATTTAAGAAGATGAATAAACTCAGATTACTTCAACTTGCTCGGAAAGGAAGTTTAGTTGCTATGGAGTTAAAATATAGTAATCTCAAATATTCATGGAATTGGAGCCAAAAGATGTTAGAGAATCTAAAGTTTCTTAATCTTAGTCATTCTCTGGAGTTGACTGAAACCCCAAACTTTGATTACATGCCTAATTTGGAAAAGATAGTACTAAAAGACTGTCCAAGTTTATCTTCCGTCTCTTATACCATTGGAGATCTCGATAAACTTCTTCTTATAAACTTGTCAAACTGCACAGGTCTTGGGACACTTCCGAGAAGCATCTATGGTTTAAAGTCTCTAGAAACCTTTATTCTTTCTGGATGTTCCTTGATCGACAAATTGGAGGAGGATTTGGAATGTATGAAATCCTTGACAACCTTAATTGTGGATAAGACTGCTATAACAAAAGTGTCCTTTTCAATAGTAAGATCTAAAAGCATTAAATATATTTCTTTACCTGGCTTTGAAGGATTTTCACGAGATGTATTTCCTTCTCTCATTCGATCTTGGATGTCACCATCAAATAATGTGATATCCCTGGTTCAAACATTTGCGCCCGTGTCATCTCTTGGTCTTTGTATGAAATGTGACTCAAAACCACAACTGTCTCAAGATGTAGCAAGAATTTTGGATGCATTGAAAGCCACAAATTGTCAGAAACTGGAACCAAGTGCAACTTCAACTCCTTCTCGTTTGATTAACGATTACATTGCTCAAGCTTCCACTTCAAAGTCTAATAATTTCTTGAAATCTTTCTTGATTCAAATGGGAATGAAACTCCAATCCACCAATATTGCCCAAGACAACATTTTACAGACTGCGGATGGAATTTGGGATCCAATTTTGCTCCCATGTTACAATATATCTGATTGGTCAACCATCAGTAGTAAAGGTTGTTCTATAATATTTGATGTCCCAACAATGAAGGGGAGTAACCTGAAGAATATGACGTTGTTCCTTGTCTATTACTCTTCCTCGGACAACATAGCATCAGAAGGTTGTCAAGGTGTGTTGATCATAAATTACACAAAGACAACCATTCAGGCATATACAAAAGATGCACTTACCTCCTTTGAGGATGAAGATTGGAAGAGCATAACATCAAATCTAGAATCTGGTAACAAAGTAGAAGTTGTGGTTGTTTTGGGGGATGGATTCATTGTTGAGAAGACTACAGTATATCTCTTATATGATGAACCAATCGACAAAGAAATGGAACACTGCAATGCAATAGGCAAGGAGAGTGTTATTGCTTTTAGTCATGAGGATAAGAATGTTGGTGTTTCTGATGGTGATAATATTCATGTCCCGATGGACCACATTATTACTGGTTCAGAGCAAGATGAAGCTTTAAGTGATGATAAGCATGGGCAGGCAATGAGTAGAAAAAGAAAGTCAGATTATTCTAATGGGATACACTACAATGCCTAA 4512 0.3825 MSTTDTTANPKGKKSYDLYLSFCGVHDDVPFVLKFREALSSYVPEALIFFDFVKLRHIGRVTVTAPSELSLNVIQDCKMVIIILSRNYTNSQSCLQELEFITQCCLTTPALIVLPVLYPIEPSLQIGIFGRPFHNFLDRVSIKEIFQGEDKIMTLVEAMSKSTQYPTDFAPTDGDEYDCVKSVVDRVISVIYKKRPELSRTFYTPSVKSSVQDVIQLLKQSKSPLVIGIWGIAGIGKTTIAKTIYDLIGPYFEGKCMLLNVGGVWGRNNGPVSLQEELLFHVNKATGFEKVTLKRNLRNKRVLVILEDVNKLEQLNALCGSRNWFGAGSKIIITTRDRRLLKEYGVDHIYRVKELDESESLDVFKWGAFGKETSPENFDELSRQVVAYSGGWPLALIALGRLLHGKEALQWEGVLWSLKNFSIPAPRLLNILEKSFNELSDNEKQTFLDIASFFIGKNQNDVLQTLNRSTQRAAFQISLLEDKSLVAIDENNKLEMHILLQAMARDIIKRESSSRTNQAKMYDVFLSFRGEDSRAKFMSHLYSSLQNAELERIMEISRARGLDVVPVFYEVDPAEVRHQEGQFGKAFEELRSTTSVNESTKTNWRRDLFDIGSKAGFVLKDSRNESGDVKNIVESVSRLLDRTELFVAEHQVGVESRVEAATKLLDIQKSEDVLVLGIWGMGGMGKTTIAKAIYNQIGSKFEGKSFLLNIREIWETNNQVSLQQQVLGDIYKTMTFKIRDIESGKIILKERLSQNRILFVLDDVNEVDQLNALCGSREWFGPGSRIIITTRDLHILNSCRVDQVHRIEEMDGNESLELFCWHAFKQSRPTKDFARHSTDVIAYSGGLPLALQVLGSYLSDCEIPVWQKVLEKLKCIPHNQVHKKLKVSFDGLKDITEKQAFLDIACFFIGMDRNDVTQILNGCGFFADIGIKVLIERSLVTVDNRNKLQMHDLLRDMGRQIIYEESPFDLEKRSRLWRPEEVFDILSKYTGTKAVKGLALEFPKTNKVCLDTKAFKKMNKLRLLQLARKGSLVAMELKYSNLKYSWNWSQKMLENLKFLNLSHSLELTETPNFDYMPNLEKIVLKDCPSLSSVSYTIGDLDKLLLINLSNCTGLGTLPRSIYGLKSLETFILSGCSLIDKLEEDLECMKSLTTLIVDKTAITKVSFSIVRSKSIKYISLPGFEGFSRDVFPSLIRSWMSPSNNVISLVQTFAPVSSLGLCMKCDSKPQLSQDVARILDALKATNCQKLEPSATSTPSRLINDYIAQASTSKSNNFLKSFLIQMGMKLQSTNIAQDNILQTADGIWDPILLPCYNISDWSTISSKGCSIIFDVPTMKGSNLKNMTLFLVYYSSSDNIASEGCQGVLIINYTKTTIQAYTKDALTSFEDEDWKSITSNLESGNKVEVVVVLGDGFIVEKTTVYLLYDEPIDKEMEHCNAIGKESVIAFSHEDKNVGVSDGDNIHVPMDHIITGSEQDEALSDDKHGQAMSRKRKSDYSNGIHYNA 1503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05205 1503 SMART till_3 521 614 IPR000157 GO:0007165
Vifa2g05205 1503 SMART till_3 15 162 IPR000157 GO:0007165
Vifa2g05205 1503 Pfam TIR domain 16 137 IPR000157 GO:0007165
Vifa2g05205 1503 Pfam TIR domain 549 637 IPR000157 GO:0007165
Vifa2g05205 1503 MobiDBLite consensus disorder prediction 1471 1503 - -
Vifa2g05205 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 904 IPR027417 -
Vifa2g05205 1503 Pfam NB-ARC domain 209 422 IPR002182 GO:0043531
Vifa2g05205 1503 Pfam NB-ARC domain 655 879 IPR002182 GO:0043531
Vifa2g05205 1503 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 143 IPR035897 -
Vifa2g05205 1503 Gene3D Ribonuclease Inhibitor 985 1220 IPR032675 -
Vifa2g05205 1503 SUPERFAMILY L domain-like 949 1194 - -
Vifa2g05205 1503 MobiDBLite consensus disorder prediction 1473 1496 - -
Vifa2g05205 1503 Gene3D - 11 192 IPR035897 -
Vifa2g05205 1503 SUPERFAMILY "Winged helix" DNA-binding domain 428 512 IPR036390 -
Vifa2g05205 1503 ProSiteProfiles TIR domain profile. 14 167 IPR000157 GO:0007165
Vifa2g05205 1503 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 522 1254 IPR044974 GO:0006952
Vifa2g05205 1503 Gene3D - 354 440 IPR042197 -
Vifa2g05205 1503 Gene3D - 810 893 IPR042197 -
Vifa2g05205 1503 Gene3D - 550 637 IPR035897 -
Vifa2g05205 1503 PRINTS Disease resistance protein signature 751 765 - -
Vifa2g05205 1503 PRINTS Disease resistance protein signature 675 690 - -
Vifa2g05205 1503 PRINTS Disease resistance protein signature 844 858 - -
Vifa2g05205 1503 PRINTS Disease resistance protein signature 1098 1114 - -
Vifa2g05205 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 450 IPR027417 -
Vifa2g05205 1503 Gene3D - 193 348 IPR027417 -
Vifa2g05205 1503 Gene3D - 638 806 IPR027417 -
Vifa2g05205 1503 Gene3D - 488 549 IPR035897 -
Vifa2g05205 1503 SMART AAA_5 672 811 IPR003593 GO:0016887
Vifa2g05205 1503 SMART AAA_5 223 355 IPR003593 GO:0016887
Vifa2g05205 1503 SUPERFAMILY Toll/Interleukin receptor TIR domain 512 615 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05205 Vifa-Chr2 1549852797 1549864171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05205 71 515 WRKY Transcription Factor Family AT4G12020 30.044 3.30e-40 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05205 - - mtr:11411578 1822.75