Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05198 ATGGAACAGGATCAATGTTGGATTCAAACAAAGAGAAAATACTCAATGAGTTCTAATACAAATATTGTTAATTCTTCTTCACTAATTACTATTCCTTCTTCTTCTTGTTATGGTGATTCATGGGAAGAACAAGCTTTTGCCGAAGATGCAGCTGCAGGTTCACTTGGTGGATGTATATGGCCACCAAGATCATATTCTTGTAGCTTTTGTAGAAGAGAGTTTAGGTCAGCACAAGCATTAGGTGGACATATGAATGTTCATAGAAAAGATAGAGCAAGACTAAAACAACAATCACCAAATGATCAAATTCTTTTTCATCATCATCATCATCATCATCATGAGGTTGAAATTGAAAATCATCATCATCTTCTTCAAAAGCCGATTATTCAAAGCGATCATAACTATTTGGCTTATAATAGTAACCTCTTCCCTAATTCACCTCTTTGTGGTTTGGTTTATCAAAAAACAAACCCTAATTCTCATCTTGATCTCTCCTCATCTTCTAAGAATTTATTCAGGGAGGAAACCCTAATTTCACCTTCTGAATCATGGTTGAACTTACCGCGAGACGATAGATTATGTTCTCCGAAGTTTCGACAAGAAGTTGATAATGATAATCTTGATGAAAAAGTCTCCAAGGGAATATTGGATTCTAGGTTAAGAGATAGAGGGGAAAATGATGATGAAAGTGATTTATCTATGAGCTTGAATTTGGTTTTGTGTAGAGCTCATCCACTCGTCCAATTCGACAAGAGAACTAAAGAAGAAGATGTGATCAATTGCAAGAAAAGAATGAAAATAGATTCTTCATCAAATCAACTATTCTCAAACTCAAAAAGCACTTTTGATAGTCGACAAAATATCCAAGCAAATATGTTTGAGTTTAGCCCTAATTCAATTGAAGACCTAGATCTGGAGTTAAGGCTTGGTACAAGGTCCAAGGTATAG 948 0.3502 MEQDQCWIQTKRKYSMSSNTNIVNSSSLITIPSSSCYGDSWEEQAFAEDAAAGSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQQSPNDQILFHHHHHHHHEVEIENHHHLLQKPIIQSDHNYLAYNSNLFPNSPLCGLVYQKTNPNSHLDLSSSSKNLFREETLISPSESWLNLPRDDRLCSPKFRQEVDNDNLDEKVSKGILDSRLRDRGENDDESDLSMSLNLVLCRAHPLVQFDKRTKEEDVINCKKRMKIDSSSNQLFSNSKSTFDSRQNIQANMFEFSPNSIEDLDLELRLGTRSKV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05198 315 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Vifa2g05198 315 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Vifa2g05198 315 Pfam C2H2-type zinc finger 65 89 - -
Vifa2g05198 315 PANTHER OS07G0101800 PROTEIN 37 312 - -
Vifa2g05198 315 SMART c2h2final6 65 87 IPR013087 -
Vifa2g05198 315 SUPERFAMILY beta-beta-alpha zinc fingers 62 92 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05198 Vifa-Chr2 1547542943 1547543890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05198 31 105 C2H2 Transcription Factor Family AT2G37740 73.333 4.00e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05198 - - cam:101506400 335.88