Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05141 ATGGATGTTATCCGAGTCCTCTCTACCGATACAATCAAGGCAGCAAAATCTAGTGTACTCTTTATCCATGCTGCCATGGAAAATACTTGTGTTGCTGATATCCTAGAACCCGTCTATGTTCCTTCAATTGTCAATTCATTTTTCCCTTTTATTGGAGTTAGTAACTATGAAGGCACATCACAACCCTTGTTGGCTATTCAAGTCACGGAGCTAGTTGATGGTATCTTCATTGGTTGCAATGTCAACCATGTGGTTGTTGATGGAAATTCCTTATGGCATTTCATCAATTCATGGGCTGAAATTTCACGTAATTCTTGTCATCGTCAATTATCCAAACTCCCAATACTCGAACGTTGGTTTTCTAATGATATTCAACATTCCATACAATTTCCTTTTACTATAGAAGCACAAAAGAATCACTCTGATGGGTCGGGTTCTTCACCGTCTGATGATGAAGAACTCAATATATCAGAGAGAATATTCCATTTCAAAAAGGAGAAAATTTTGCAACTAAAATCAAAAGTCAATACACATATTGATAGTAGTAGTAACATCAAAATATCCTCCCTACAAGCGCTTTTAACACATGTTTGGTGCTCCTTTGTTCGTTCCAAACAATTTGATCCACAAGAAGAAGTTCATAACATGTTTTTGATAGGGGTTAGACCAAGATTACTTCCACCATTGCAAGAAGGTTATTTTGGAAACGCAATTACAGGTTGCAGTGTTACCATGAAAGCTGGAGAGTTGTTGAAGGAAGGTGGGGTTTGCAATGGTGCTTGGGAGATGAACAAGTTAATTGCTTCATACACTAATGAGAAGATAAAAAATGACTACGAGTCTTGGTTGAAGAATCCAATAATTTTTAGGTTTAATGGAAAAACGAATAATAATTACTTAATCATGAGCAGTTCTCCACGGTTTGATGTTTATGAAGAAGGTAGTATTGATCTTCAAGTTCGTCTTCCTTACATTATTTTAGAAGCAATGGGAAGTGACCTTCACTTCATGAATGTTGTGTCCAAGTGA 1029 0.3673 MDVIRVLSTDTIKAAKSSVLFIHAAMENTCVADILEPVYVPSIVNSFFPFIGVSNYEGTSQPLLAIQVTELVDGIFIGCNVNHVVVDGNSLWHFINSWAEISRNSCHRQLSKLPILERWFSNDIQHSIQFPFTIEAQKNHSDGSGSSPSDDEELNISERIFHFKKEKILQLKSKVNTHIDSSSNIKISSLQALLTHVWCSFVRSKQFDPQEEVHNMFLIGVRPRLLPPLQEGYFGNAITGCSVTMKAGELLKEGGVCNGAWEMNKLIASYTNEKIKNDYESWLKNPIIFRFNGKTNNNYLIMSSSPRFDVYEEGSIDLQVRLPYIILEAMGSDLHFMNVVSK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05141 342 Gene3D - 133 323 IPR023213 -
Vifa2g05141 342 Gene3D - 4 127 IPR023213 -
Vifa2g05141 342 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 312 - -
Vifa2g05141 342 Pfam Transferase family 19 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05141 Vifa-Chr2 1533796389 1533797726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05141 60 253 Monolignol Biosynthesis Gene Families AT5G48930 28.718 1.03e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05141 - - gmx:100500257 317.39