Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05097 ATGGCACAAAAACATATTCTCATATCACTAGCTATTTTTCTCTCACTCCTCTTTGAGTCCTCTTTGGCCAAACATAACTCTCAAACAATAAACTACATAAAATCCTCTTGCAATGGTACCCTCTACCCTAATCTATGCATTCGTTGCCTTAACAAATTTTCACATTCAACCATAAATGGTCCACAACACTTAGCCCAACTTGCCTTATCTGTAAGCCTCTCTAGAGCCCTACAAACAAGAGTGTACCTTTTAAATGTAGTCAAGGAACTCAAAACAACTGATCATAACAATAAAAGGATGTACCTAACCGTGCAAGATTGTGTGAATCAAATAAATGATAGTGTTGACCAACTTAGCCAAGCCATCAAAGAACTAAAAAGGTTAAACCAAATTAGCACCATCATCAATGATAAAGTGTTGTGGCACATAAGTAATGTTGAGACATGGGTTAGCACGGCGTTAACTGATGCTAGTAGTTGTGTACAATCATTTCCTGGTCGCAGAATGAGCAAAAGGGTTGCGGCAATTAAGGTTAGGGCGAAGAATGTTGCAGAAGTTACTAGTAATGCACTTGCTTTGTTTCAAAGTTATGCTTCTAGGTACAAACTTGCAGCAGCTGGAACAACCAAGAAGCCTTGA 639 0.3865 MAQKHILISLAIFLSLLFESSLAKHNSQTINYIKSSCNGTLYPNLCIRCLNKFSHSTINGPQHLAQLALSVSLSRALQTRVYLLNVVKELKTTDHNNKRMYLTVQDCVNQINDSVDQLSQAIKELKRLNQISTIINDKVLWHISNVETWVSTALTDASSCVQSFPGRRMSKRVAAIKVRAKNVAEVTSNALALFQSYASRYKLAAAGTTKKP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05097 212 Coils Coil 108 131 - -
Vifa2g05097 212 SMART PMEI_2 28 193 IPR006501 GO:0004857
Vifa2g05097 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 197 IPR035513 -
Vifa2g05097 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 195 IPR035513 -
Vifa2g05097 212 CDD PMEI-like_3 35 199 - -
Vifa2g05097 212 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
Vifa2g05097 212 NCBIfam pectinesterase inhibitor domain 5 196 IPR006501 GO:0004857
Vifa2g05097 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 193 - -
Vifa2g05097 212 FunFam Pectinesterase inhibitor 3 28 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05097 Vifa-Chr2 1524917620 1524918258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05097 19 194 Carbohydrate Esterase AT5G53370 27.568 1.36e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05097 - - gmx:100791798 288.885