Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05096 ATGGCACAAAAACATCTTCTCATATTACTAGCTATTTTTCTCTCACTCCTCTTTGAGTCCTCTTTGGCCAAACATAACTCTCAAACAAAAACCTACATAGAATCCTCTTGCAATGGTACCCTTTACCCTAATCTATGCATTCGTTGCCTTAACAAATTTTCACATTCAACCGTAAAGGGTCCACAACACTTAGCCCAACTTGCCTTATCTGTAAGCCTCTCTAGAGCCCTACAAACAAGAGTGTACCTTTTAAATGTAGTCAAGGAACTCAAAACAACCGATCATAACAATAAAAAGATCTACCTAACCGTACAAGATTGTGTGAATCAAATCAATGATAGTGTTGACCAACTTAGTCAAGCCATCAAAGAACTAAAAAGGTTAAACCAATTTAGCGCCATCATGAATGATAAAGTGTTGTGGCACATAAGTAATGTTGAGACATGGGTTAGCACGGCGTTAACTGATGCTAGTAGTTGTGTACAATCATTTCCTGGTCGCAGAATGAGCAAAAGGGTTGCGACGATTAAGGTTAGGGCGAAGAATGTTGCAGAAGTTACTAGTAATGCACTTGCTTTATTTCAAAGTTATGCTTCTAGGTATAAACTTGCAGCAGCTGGAACAACCAAGAAGCCTTGA 639 0.3881 MAQKHLLILLAIFLSLLFESSLAKHNSQTKTYIESSCNGTLYPNLCIRCLNKFSHSTVKGPQHLAQLALSVSLSRALQTRVYLLNVVKELKTTDHNNKKIYLTVQDCVNQINDSVDQLSQAIKELKRLNQFSAIMNDKVLWHISNVETWVSTALTDASSCVQSFPGRRMSKRVATIKVRAKNVAEVTSNALALFQSYASRYKLAAAGTTKKP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05096 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 195 IPR035513 -
Vifa2g05096 212 SMART PMEI_2 28 193 IPR006501 GO:0004857
Vifa2g05096 212 FunFam Pectinesterase inhibitor 3 28 198 - -
Vifa2g05096 212 CDD PMEI-like_3 35 199 - -
Vifa2g05096 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 197 IPR035513 -
Vifa2g05096 212 Coils Coil 108 128 - -
Vifa2g05096 212 NCBIfam pectinesterase inhibitor domain 5 196 IPR006501 GO:0004857
Vifa2g05096 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 193 - -
Vifa2g05096 212 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05096 Vifa-Chr2 1524909190 1524909828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05096 19 194 Carbohydrate Esterase AT5G53370 26.776 1.01e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05096 - - gmx:100791798 282.722