Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05077 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATTCTCAAAATTCTCAAATTTCATCAGTACCACCAAACTCTGCCATATTTTTTCTGTCACCAAACAATCCAAATATGTATAAAAATCCTAATCCTCAAAATTCTCAAGTTCCACCATTTTCTACTCAAGTTGGTGTTGAAAAAGAAGAAAGGGTTCTCGTTAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAGGATATATGTCTTATCCAATCATGGCTCAGTGTTTCAAAGGATCCAATTACAAGCTGTCAATGGAAAGAAAAGTGGGACATCGGAGAACGATATCATGGCTGCTGCACATGCTTTTTATGCTCAAGATCAAGGTACAATATTCAATCTTGAGTATGCATGGCGATTATTAAAAGATGAAGCTAAATGGGGCATCATCGGAGAATCGATTGGAAATTCTTCAAAAATGACACAAATTTCTGCTAGTGGGGCATCATCGAAGATCCCTGATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATAGTGCGCCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGAAAATTTCAAATGCAACGCAAGATGCAAGGAATAAAAGAGCAGAAACAATGGAAAGACTTGCGCAAAGTAAGGAGGACGAGATAAAATTAAAGGTAATGCAAATCATGATGAAAGACACTTCTACTATAAACGAAAGTCAACGAGATATTCATGAAAAATATTGTAATAAAATGAAAAAAAATATGGACTGTAGTTAG 816 0.3505 MDPNHFHYQQAMFNFMQNYQNPNSQNSQISSVPPNSAIFFLSPNNPNMYKNPNPQNSQVPPFSTQVGVEKEERVLVKKNLESNLQGMRIYVLSNHGSVFQRIQLQAVNGKKSGTSENDIMAAAHAFYAQDQGTIFNLEYAWRLLKDEAKWGIIGESIGNSSKMTQISASGASSKIPDTPSSYEFNSSSPIVRPMGQKAAKRKGKAKKISNATQDARNKRAETMERLAQSKEDEIKLKVMQIMMKDTSTINESQRDIHEKYCNKMKKNMDCS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05077 271 Pfam No apical meristem-associated C-terminal domain 135 255 IPR029466 -
Vifa2g05077 271 PANTHER - 96 266 - -
Vifa2g05077 271 Coils Coil 212 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05077 Vifa-Chr2 1516018516 1516019486 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05077 105 226 Glutathione S-transferase Gene Family AT5G41240 32.031 2.47e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05077 - K19269 psat:127115199 276.174