Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05076 ATGTTTTCCCTTCTATTTCTACTTCTTCTATGTCTAATTTTTCCTTTGCTAATATTCTTCCACAGACATGGAACCACTAAAAATCTTCCACCTGGTCCTAAAGGCCTTCCCATAATAGGAAATCTTCATCAACTAGACATTTCTAAACTTTATCTTCAATTATCACAATTCTCAAAAATATATGGTCCTATATTTTCACTTCAACTTGGTTTTAGACAAGCTATTGTTGTTTCTTCAGTTGAAATTGCAAAAGAAGTATTGAAAAACAAGGGTGATGTGTTTTGTAATAGACCTATGTTATATGGTCAACAAAAGTTAACTTATAATGGGTCAGAAATGGTGTTTGCTCCTTATGGTGAAGTTTGGAGAGAACTAAGAAAAATTTGTGTTTTTCATATTTTTAGTTCCAAACGTGTATCATATTATTCTTCTATAAGAAAGTTTGAGGTGAAGAAAATGATCAAGAAAATTTCCGAGCATGCTAGTTCTTCAAGTAATATAAATTTGAGTGAGTTATTGATTTCACTCTCAAGTACTATAATATGTAGAATTGCTTTTGGGAAAAGCTATGAGGATGAAGGACATGAGAGAAGTAGGTTTCATGGATTGTTGCATGAGTTTCAAGCTTTGTTAGCAGAATTCTTTGTTGCTGATTATATTCCATACATGGGTTGGATTGATAAAGTGAGGGGATTGCATGGTCGAGTTGATAGATGTTTCAATGAATTTGATGAATTTTATCAAGAGATTATTGATCAACATTTGGATCCAAATAGAGAGCATGGAGATGAAGATGTTATTGTTGATGTCTTACTCAAATTGAAGAAACAAAATGTGTCTTCAATTGATCTCACTTTTGATCACATCAAAGGAGTCCTTGTGGACATGCTTGTAGCCGCAACAGATACCACATCAGCCACATCTGTTTGGACTTTAACTGCCCTAATAAAAAATCCAAGAGTAATGAATAAATTACAAGAGGAAATTAGAAGTATTGGAGTGATAAAAGAGACATTAAGATTGTACTTACCAGCTCCACTTCTTGTACCAAGAGAATCAAGTGAAAATTGCACTATTAATGGCTATAACATTCCAGCCAACACAATATTATATGTGAATGCTTGGGCTATTCAGAGAGACTCTGATATTTGGAAAAATCCAGAAGAGTTTTATCCCGAAAGATTCTTAGAAAATTCTATAAATTTTCTTGGACAGAATTTTGAACTAATTCCCTTTGGAGCTGGTCATAGAATTTGCCCTGGTTTGTCTATGGCTGTTGCTTCAATAGAACTTATCCTTGCAAATCTTCTATATTCATTTGATTGGAAATTGCCACACGGGTTGGTAAAAGAAGATATTGATACTGAAATGTTGCCAGGAATCACTCAACACAAGAAACATCCTCTTTACCTAGTTGCCAAGAGCTCAATGTAG 1434 0.3382 MFSLLFLLLLCLIFPLLIFFHRHGTTKNLPPGPKGLPIIGNLHQLDISKLYLQLSQFSKIYGPIFSLQLGFRQAIVVSSVEIAKEVLKNKGDVFCNRPMLYGQQKLTYNGSEMVFAPYGEVWRELRKICVFHIFSSKRVSYYSSIRKFEVKKMIKKISEHASSSSNINLSELLISLSSTIICRIAFGKSYEDEGHERSRFHGLLHEFQALLAEFFVADYIPYMGWIDKVRGLHGRVDRCFNEFDEFYQEIIDQHLDPNREHGDEDVIVDVLLKLKKQNVSSIDLTFDHIKGVLVDMLVAATDTTSATSVWTLTALIKNPRVMNKLQEEIRSIGVIKETLRLYLPAPLLVPRESSENCTINGYNIPANTILYVNAWAIQRDSDIWKNPEEFYPERFLENSINFLGQNFELIPFGAGHRICPGLSMAVASIELILANLLYSFDWKLPHGLVKEDIDTEMLPGITQHKKHPLYLVAKSSM 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05076 477 PANTHER CYTOCHROME P450 71B11-RELATED 12 474 - -
Vifa2g05076 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Vifa2g05076 477 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 CDD CYP71-like 61 469 - -
Vifa2g05076 477 SUPERFAMILY Cytochrome P450 30 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 Pfam Cytochrome P450 334 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 Pfam Cytochrome P450 30 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 FunFam Cytochrome P450 83B1 17 472 - -
Vifa2g05076 477 Gene3D Cytochrome P450 19 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05076 477 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05076 Vifa-Chr2 1515621269 1515623092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05076 5 472 Cytochrome P450 AT4G31500 42.683 5.58e-149 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05076 - - lja:Lj3g3v1475790.2 617.076