Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05075 ATGTTGTTTCTTGTACTAGTTCTTCTTGTTCTGTGTCTCATCTTTCCTTTGTTTTTGTTCTTCTTCAAACATAGAACCATGCCACCCGGTCCTAAAGGTCTTCCCATAATAGGAAATCTTCATCAACTAGATATTTCTAATCTTTATCTTCAATTTTCACAATTCTCAAAAATATATGGTCCCTTGTTTTCAATTCAACTTGGTTTAAAACCAGCTATAGTCGTTTCTTCAGCTGAAATTGCCAAAGAAGTATTGAAAAACAATGATCTTGTGTTTTCTACTAGACCTTTACTATATGGTCAACAAAAACTATCTTATAATGGATCAGATATTGCATTTTCTCCATATAGTGATCATTGGAGAGAAATAAGAAAAATTTGTATTCTTCATATTTTTAGTTCCAAAAGTGTGTCAAGTTTTTCTTCTATAAGAAAACTTGAGGTGAAGAAAATGATTAAAAAAATTTCAGGGCATGTTGATTCTTCGGTTGTTACAAATTTGAGTGAGTTATTAATTTCACTCTCAAGTAGTATGATATGTAGGATTGCTTTTGGTAAAAGCTATGAAGATGAAGGACATGAGAGAAGTAGATTTCATGAAATGTTGCATGAGTTTCAAGCTTTGTTAGCAGAATATTTTGTTTGTGATTATATTCCATGCATGGGTTGGATTGATAAACTGAGAGGATTGCATGGTCGTGTTGATAGATGTTTCAAGGAATTTGAAGAGTTTTATGAAGAGATTATTGATGAACATTTGGATCCAAATAGAGAACAAATTAAAGATGAAGAGGATATTGTTGATATCTTACTCCAATTGATGAAAGAACGTTCACTTCCTTTTGATATCACTTTTGATCACATCAAAGGAGTTCTTATGGCAACAGATACTACATCAGCCACATCAGTTTGGGCAATGACTGCTTTAATAAAATATCCAAGAGTAATGAAAAAAGTACAAGCAGAAATTAGGAATTTGGAATCCAAAAAAGATTATCTAGAAGAAGATGATATTCAAAATTTTCCTTATCTAAAAGCAGTAATAAAAGAGACACTAAGATTGTATCTACCTGCCCCACTGCTTGTGACAAGAGAATCAAGAGAAAAATGCACTATAAATAGCTACAATATTCCAGCTAAAACGATATTGTACGTGAATGCTTGGGATATTCATAGAGACCCTAATATTTGGAAAAATCCTGATGAATTTTATCCTGAGAGATTCTTAGAAAGTTCTATAAATTTTATTGGACAAGATTTTGAGCTAATACCCTTTGGAGCTGGTCGTAGAATTTGTCCAGGTATATCTATGGCAACCGCATCTTTGGAACTTATCCTGGCTAATGTTTTATATTTTTTTGATTGGAAACTTCCACATGGGTTGATGGAGAAAGATATCGATACTGAAATGTTGCCAGGAATCACTCAACATAAGAAAAATCCTCTTTGCCTTGTTGCCAATATCCATAAGTAG 1473 0.3265 MLFLVLVLLVLCLIFPLFLFFFKHRTMPPGPKGLPIIGNLHQLDISNLYLQFSQFSKIYGPLFSIQLGLKPAIVVSSAEIAKEVLKNNDLVFSTRPLLYGQQKLSYNGSDIAFSPYSDHWREIRKICILHIFSSKSVSSFSSIRKLEVKKMIKKISGHVDSSVVTNLSELLISLSSSMICRIAFGKSYEDEGHERSRFHEMLHEFQALLAEYFVCDYIPCMGWIDKLRGLHGRVDRCFKEFEEFYEEIIDEHLDPNREQIKDEEDIVDILLQLMKERSLPFDITFDHIKGVLMATDTTSATSVWAMTALIKYPRVMKKVQAEIRNLESKKDYLEEDDIQNFPYLKAVIKETLRLYLPAPLLVTRESREKCTINSYNIPAKTILYVNAWDIHRDPNIWKNPDEFYPERFLESSINFIGQDFELIPFGAGRRICPGISMATASLELILANVLYFFDWKLPHGLMEKDIDTEMLPGITQHKKNPLCLVANIHK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05075 490 CDD CYP71-like 59 482 - -
Vifa2g05075 490 Coils Coil 316 336 - -
Vifa2g05075 490 PANTHER CYTOCHROME P450 71B11-RELATED 12 486 - -
Vifa2g05075 490 FunFam Cytochrome P450 83B1 21 485 - -
Vifa2g05075 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Vifa2g05075 490 Gene3D Cytochrome P450 22 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 Pfam Cytochrome P450 28 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g05075 490 SUPERFAMILY Cytochrome P450 28 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05075 Vifa-Chr2 1514654921 1514656917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05075 6 489 Cytochrome P450 AT4G31500 45.291 2.55e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05075 - - lja:Lj3g3v1475790.2 658.677