Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05025 ATGAGGAATAACAAGTTCAAGCTTTCAGACATGATTCCCAATGCTTGGTTTTACAAGCTAAAGGAAATAGGCAAACCAAAAAACCAAACATCAACAACGACCTCAAAGAACAGAAAACATTCATCTTCCTTACCCTCAAAAACAACCTCAATATCCTCAAAACCAAATCAACCCAACCAAAACCAATACATTCCTAGAAAATCTTACTACTTCACAAGAAACCTTAACCAAAACAACAACATCAAATTATCCTCTTCTTCACCATCCAAAAACAGAACAAGAAAAACAACAACAACAACATCAACAACATCAAAATCAAAAACATGTTCTTCACCAAAACGTGTCACCTCCTCTGTCTCCGCTGATTGTAGCTGCCGAACCACACTCGAATCCGTCTGGACGAAATCAGAAACACTTTCTTCCTCTCCGCTAAACAGCTTATATGAGTCGGAATCCGTTGACACAGAGTTCAGAACAGATAGAGTTCTGCTTCCCAATGAAACATCATTCGATGAAATGGTTTCTTTCTCCATTTCTTCTTGTCCTTGCAACAACAACAATATCAACAACAACATAGATATTGTTATCGATGTCGACAAAAATTCCCTACCTAGAAAAGATGATAAACTTGAAGACTACAATTCATATAAACTACAACTTCCTCCTATCATCACAAAACCAAAAATCAAAAAAGAACACAAACCCGAACAACAACAACAACAACAACAACCGAAGAACATGAACAAGAACAGGAACAAGATTGGTTCGGTAAATTCTCCTGGAATGAAGCTTCGTATAAAATCTCCAAAAATCGCCACTAAAAAACTTCAGATATATCACAACCGGAAAAGTGCATCGTCAACAACAACGACAACAACGACAACAACCTCCGGCTACCACCGGAGAAGAAGCTTCTCCGGTAGTGTTGCAATAGTGAAGTCATCTTTTAATCCTCAGAAGGATTTCAGAGAGTCAATGGTGGAGATGATTGTGGAGAATAACATAAGAGAATCAAAGGATTTGGAAGATCTTCTTGCTTGTTATCTTTCTCTGAATTCAGATGAGTATCATCAGCTTATCATCAAGGTGTTCAAGCAAATATGGTTTGATTTGACTGAAAACAGGGTACAGAAATATAACTAG 1143 0.3745 MRNNKFKLSDMIPNAWFYKLKEIGKPKNQTSTTTSKNRKHSSSLPSKTTSISSKPNQPNQNQYIPRKSYYFTRNLNQNNNIKLSSSSPSKNRTRKTTTTTSTTSKSKTCSSPKRVTSSVSADCSCRTTLESVWTKSETLSSSPLNSLYESESVDTEFRTDRVLLPNETSFDEMVSFSISSCPCNNNNINNNIDIVIDVDKNSLPRKDDKLEDYNSYKLQLPPIITKPKIKKEHKPEQQQQQQQPKNMNKNRNKIGSVNSPGMKLRIKSPKIATKKLQIYHNRKSASSTTTTTTTTTSGYHRRRSFSGSVAIVKSSFNPQKDFRESMVEMIVENNIRESKDLEDLLACYLSLNSDEYHQLIIKVFKQIWFDLTENRVQKYN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05025 380 MobiDBLite consensus disorder prediction 239 257 - -
Vifa2g05025 380 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Vifa2g05025 380 MobiDBLite consensus disorder prediction 79 111 - -
Vifa2g05025 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 45 373 IPR038933 GO:0045892
Vifa2g05025 380 MobiDBLite consensus disorder prediction 225 263 - -
Vifa2g05025 380 MobiDBLite consensus disorder prediction 27 63 - -
Vifa2g05025 380 NCBIfam uncharacterized plant-specific domain TIGR01568 309 372 IPR006458 -
Vifa2g05025 380 Pfam Transcriptional repressor, ovate 315 371 IPR006458 -
Vifa2g05025 380 ProSiteProfiles OVATE domain profile. 311 370 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05025 Vifa-Chr2 1492305372 1492306514 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vifa2g05025 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05025 - - cam:101506553 360.533