Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05019 ATGGCTGATAATAAACTTAGACTCTGTGTATTGATATGTCTTATCAGCATAATCTCAGCATCAAGTTTAATTCCTTCAGCAACTACTTATGTGTCTTCAAACATACCTGATCCTTTTGGTAAGTTGAGTTCCTCTTTTTATGAAACAAGGTGTCCTGGTGCTCTTCAAATCATTAAGGCAGCAATAACCAGTGCGGTAGAGAATGATCGGCGATTGGGTGCATCTTTGCTCCGTCTACATTTTCATGACTGCTTTGTTCAAGGATGTGATGCATCAGTATTGTTAAAGGACACACCAGATTTCAAGGGAGAACAAAATGCCCGTCCCAATGCGAATTCTCTAAGAGGTTACGAAATCGTAGAAGCTGTAAAAGCTTTATTGGAGATACGGTGCCCTCAGGTTGTTTCATGTGCAGACATCTTAGCTGTTGCAGCCAGAGATTCAGTTGTTGTTCTTGGTGGACCTTTTTGGCTAGTTCCTCTTGGAAGAAGAGACTCAAAAACTGCAAATTTGAATGCTGCTAATTCAGATTTACCATCTCCATTTCTTGATCTTAAGGGGCTTATTGATGCTTTCTACAAAAAGGGTTTCTCAGCTCAAGAAATGGTTGCTTTATCAGGTGCTCACACAATAGGCAAATCAAAATGCGCAGTCTACCGATCAAGGATTTACAACGAAAGCAATATTGATTCTGATTACAAAATATCATTGCAGGCAACTTGCCCAAACATTGGTAATGATAACTACTTATCTCCTTTAGACACCACAACTCCAGACACCTTTGACAACGGTTTTTACAAAGACTTATTGTACAATAAGGGTCTTTTGCATTCTGATCAACAACTATATAATGGTGGTTATGGTTCCACTGATAAACAAGTTTCAGATTATGCCAACAATGCAGCACTCCTGGGCTTGGATTTCGCTAACGCGATGATTAAGATGGGAAATCTCAGCCCTCTAACCGGCAACCAGGGTGAGATCAGAAAATATTGCTCGAATGTGAATAAAGTTTGA 1017 0.3972 MADNKLRLCVLICLISIISASSLIPSATTYVSSNIPDPFGKLSSSFYETRCPGALQIIKAAITSAVENDRRLGASLLRLHFHDCFVQGCDASVLLKDTPDFKGEQNARPNANSLRGYEIVEAVKALLEIRCPQVVSCADILAVAARDSVVVLGGPFWLVPLGRRDSKTANLNAANSDLPSPFLDLKGLIDAFYKKGFSAQEMVALSGAHTIGKSKCAVYRSRIYNESNIDSDYKISLQATCPNIGNDNYLSPLDTTTPDTFDNGFYKDLLYNKGLLHSDQQLYNGGYGSTDKQVSDYANNAALLGLDFANAMIKMGNLSPLTGNQGEIRKYCSNVNKV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05019 338 SUPERFAMILY Heme-dependent peroxidases 42 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 Gene3D Peroxidase, domain 2 179 315 - -
Vifa2g05019 338 FunFam Peroxidase 179 315 - -
Vifa2g05019 338 FunFam Peroxidase 45 186 - -
Vifa2g05019 338 PANTHER PEROXIDASE 72-RELATED 34 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 Gene3D - 46 333 - -
Vifa2g05019 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Vifa2g05019 338 Pfam Peroxidase 59 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Vifa2g05019 338 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 CDD secretory_peroxidase 41 333 IPR033905 GO:0004601|GO:0042744
Vifa2g05019 338 ProSiteProfiles Plant heme peroxidase family profile. 41 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g05019 338 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05019 Vifa-Chr2 1489645178 1489646525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g05019 41 336 Peroxidase AT5G05340 54.698 1.20e-119 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05019 K00430 - ming:122070187 397.512