Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04991 ATGGATGCCACTCATACCATGTTTTGTAACAATGATATTGTTAACCCTCTAAGCTCCATGGGAATGCAAGTTTCATGCATTCTTGTTGTATCACATTTCTTCAATGTCCTCCTTAGAAGTTTGGGTCAACCTGGTCCCATTGCACAAATTCTGGCTGGGTTGATATTAGGACCAATGTCACATATACCATATATAAAAAATACATTCTTCCCACCAAGTTCAATAAACTACTATGAAATTGTTGGCTTCTTCTGTCGCATACACTTCATGTTCTTATTCGGTTTAGAGACAAACCTTCAATACACATTGCGCAATCTACGTTTGGTTACATTGGTAGCATGTGGTGGTGCCCTAGTTGGTGCAGTTTTCGGTCTATCAGTCTCATTTTATTTATACCAAAACCTAAATCTAAATCTCGACATTTACTATTTCTGCATGGTCATCATGCTAATGGTATCATACACGAGCTCCCCGATGGTGATCCGTTTATCGGCCGAGTTACGTTTTGCAGCGTCTAATATCGGGCGAATAGCAGTGTCCTCCGCATTGATAACCGAAATGGGCTGCTTGATATTCTTTGACGTAGTGGTTTGTTGGAAAAAACCTAACCACATTTCCAATGGTTTTCTATGTACTATCACTGTATCTTTTGTGATTCTGATTAACAAATACTTAGCCGTATGGTTAAACTCGAGAAACCGTTACCAAAAACACCTAAAAGCAGCTGAGTTATTACTCATACTTTTTGTTCTTCTAACAAGCTCAATGGTTATAGAAATCTTGGGTTACAATAGTATTATTAGTTGTTTTATTATTGGATTGTTGTTTCCTAAAGAAGGTAAAACAGCTAGGACTTTGATATATAAACTTGGTTATTCAATTTATAATTTTGTTCTTCCTATTTATTTTGGGTATATGGGTTTACAATGTGACCTCATACAAGTGTTTAGAAGCTTGAATAAAACAACAGATACTGCAATATTGATTTTGTTGTGCATTGGAAGCAAACTTGGTGGCACACTTTTGGTTTGTAGATACCTTCATATTCCTACAAGTGAAGGAATTTTCATTGGCTTCATATTGAATACTAGAGGTTATGCTGATTTGTTGTTCATTGCTGCTGTAGCAAAACATGCCGTCGATCTCGACCTAGAGGCTTACAATATGTTGATAGTATCGATAATATTGAACACAGTTATATCAGGAATAGTTGTGGCGTTTCTAGCAAAAGGGGAAGCGAAAATGTTTTCGAACAACCATACTACAGTTGAGCCTCAACAAATGGAAGACGAGCTTCGAATTTTGGCTTGTGTATATGATCCTCGACAAGTATCCGCGGTACTCGCCACAATACTAGCCATGCATGGATCAAGAACATCGCCTTCCACGACTTATTTAATGCATTTGATAGAACTCGTGAAGAAAATCAAGTCGAATTTGTTGTACCATGAAAAGGAAAACGGAAGCCTCAGCGATGACGAAGAAGCCTATGGTGGAAATGATGTGGTGGACATTAATAATGCCTTAGATGCATTCACTTTAGACACAAAGATTTTGATTCACCAAAAAAAGACGGTATCTTGTTTCCCAAGTATGTATGAAGATGTTTGCAACGAAGCGGAAGATCTTAAAGTGACAATAATTTTAATTCCTTTTCACAAACACGAGCGCATTGATGGAAAACTCGAAAGTGGCAAAGAAAGTATAGTAGTTACTAATCAGAAGATTCTCAGACACGCGCCTTGTTCGGTTGGAGTAATCATTGAAAGAGGACTTACTAAGACATTTGGTTTCTCGGAACTAATTGAGTCCGAAGCCACACAAAATGTTGCAACACTTTTCTTCGGGGGACCAGATGACCGCGAGGCGATTGCTTGGAGCCTAAGAATCTCCAAATGCCCTCATATTAACTTGACGATTATTAGATTTTTGCCGGCTTCATCACAAAATGAACAAATTAATGAAAACGGAGTACAATCCGATGGAAAGGAGATTCTAATGTCATTGTCGGGGGAAGAGAGTGAGAACGACGAGATTGACAATACGTTTATGGTTGATTTCTATAATCGGCATGTGACATTAGGCCAAATTGGATACGTGGAAAATTTTGTGAAGGATGGAAAGCAAACATTGGAATGTTTGAAAGATGTTGGAGACATGTACTCTTTGTTTGTGGTTGGAAAAGGTGGTAGGAGAAATAATTCATTAACAATAGGTATGAGTGATTGGGAGGAGTGTCCTGAACTTGGAACAGTTGGTGATGTGTTGGCTTCTTCAGATTTTGATATTCATGGATCTGTTTTGGTTATTCAACAACATAGAGATGCTAAGAAAGGTTTAATACATTATTAG 2352 0.3788 MDATHTMFCNNDIVNPLSSMGMQVSCILVVSHFFNVLLRSLGQPGPIAQILAGLILGPMSHIPYIKNTFFPPSSINYYEIVGFFCRIHFMFLFGLETNLQYTLRNLRLVTLVACGGALVGAVFGLSVSFYLYQNLNLNLDIYYFCMVIMLMVSYTSSPMVIRLSAELRFAASNIGRIAVSSALITEMGCLIFFDVVVCWKKPNHISNGFLCTITVSFVILINKYLAVWLNSRNRYQKHLKAAELLLILFVLLTSSMVIEILGYNSIISCFIIGLLFPKEGKTARTLIYKLGYSIYNFVLPIYFGYMGLQCDLIQVFRSLNKTTDTAILILLCIGSKLGGTLLVCRYLHIPTSEGIFIGFILNTRGYADLLFIAAVAKHAVDLDLEAYNMLIVSIILNTVISGIVVAFLAKGEAKMFSNNHTTVEPQQMEDELRILACVYDPRQVSAVLATILAMHGSRTSPSTTYLMHLIELVKKIKSNLLYHEKENGSLSDDEEAYGGNDVVDINNALDAFTLDTKILIHQKKTVSCFPSMYEDVCNEAEDLKVTIILIPFHKHERIDGKLESGKESIVVTNQKILRHAPCSVGVIIERGLTKTFGFSELIESEATQNVATLFFGGPDDREAIAWSLRISKCPHINLTIIRFLPASSQNEQINENGVQSDGKEILMSLSGEESENDEIDNTFMVDFYNRHVTLGQIGYVENFVKDGKQTLECLKDVGDMYSLFVVGKGGRRNNSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGLIHY 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04991 783 PANTHER CATION/H + ANTIPORTER 11 774 - -
Vifa2g04991 783 Pfam Sodium/hydrogen exchanger family 27 410 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa2g04991 783 Gene3D - 19 416 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04991 Vifa-Chr2 1481256030 1481258980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04991 7 776 Antiporter Super Family AT1G16380 37.500 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04991 K26731 - gmx:100804522 1228