Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04970 ATGATTGCTTTGTTAATGGGTGTGATGCCTTCTATGTTGCTTGATGATACACCAACGATGCTTGGAGAGAAATTGGCCCTTTCAAATATAAATTCTCTAAGATCATTTGAGGTTGTTGATAAGGTTAAAGAGGCTCTTGAGAAGGCTTGTCCTGGAGTTGTTTCTTGTGCTGATATCATAATCATGGCTTCTAGAGATGCTGTAGCACTGACAGGAGGACCTGATTGGGAAGTGAAGTTAGGAAGATTGGACAGTTTAACAGCAAGTCAAGAAGACTCAAACAATATCATGCCAAGTCCAAGAGCCAATGCAACTGCTCTCATTACCCTCTTCAAAAAATACAATCTCTCTGTCAAAGACCTTGTAGCACTTTCAGGATCTCACTCTATCGGCCAAGGTCGTTGTTTTTCGATCATGTTTAGGCTGTACAATCAATCGGGAAGTGGTAAACCCGATCCGGCCATTGATCCACACTTCAGAGCCGAGCTTGACAAGCTATGTCCGCTTGATGTTGATCAAAACAAGACAGGAAACCTTGATGCAACTCCTGTGATTTTCGATAACCAATATTTCAAGGACTTGGTTGGTGGAAGAGGGTTTCTCAACTCTGATCAAACACTTTACACTTTCCCTCAGACAAGAGGGTTTTTCGGTCGACCTGGCGAGGTCAGGAAGAATTGCAGAGTGGTCAATCCTCGTCCTGCTCATTTCCTGATTGAAAACAACTTGCAGGATAGTGATCTACCAATGTAA 753 0.4276 MIALLMGVMPSMLLDDTPTMLGEKLALSNINSLRSFEVVDKVKEALEKACPGVVSCADIIIMASRDAVALTGGPDWEVKLGRLDSLTASQEDSNNIMPSPRANATALITLFKKYNLSVKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIDPHFRAELDKLCPLDVDQNKTGNLDATPVIFDNQYFKDLVGGRGFLNSDQTLYTFPQTRGFFGRPGEVRKNCRVVNPRPAHFLIENNLQDSDLPM 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04970 250 PRINTS Plant peroxidase signature 119 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PRINTS Plant peroxidase signature 193 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PRINTS Plant peroxidase signature 72 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PRINTS Plant peroxidase signature 177 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PRINTS Plant peroxidase signature 34 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PRINTS Plant peroxidase signature 53 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 SUPERFAMILY Heme-dependent peroxidases 10 232 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PRINTS Haem peroxidase superfamily signature 54 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PRINTS Haem peroxidase superfamily signature 120 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PRINTS Haem peroxidase superfamily signature 72 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 FunFam Peroxidase 98 220 - -
Vifa2g04970 250 Gene3D Peroxidase, domain 2 98 213 - -
Vifa2g04970 250 Pfam Peroxidase 20 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 PANTHER PEROXIDASE 72-RELATED 8 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 ProSitePatterns Peroxidases proximal heme-ligand signature. 120 130 IPR019793 -
Vifa2g04970 250 ProSiteProfiles Plant heme peroxidase family profile. 4 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g04970 250 CDD secretory_peroxidase 11 230 IPR033905 GO:0004601|GO:0042744
Vifa2g04970 250 Gene3D - 10 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04970 Vifa-Chr2 1475249129 1475250296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04970 7 239 Peroxidase AT2G22420 70.656 5.01e-130 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04970 K00430 - gmx:100793330 382.104