Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04939 ATGGAAAGCTTAGGAACATTATTATCATCACTAAGTTTGAAACCTACGAAAGTTGCAGTTATCACTGTGATTATTACAGTTCTGATATGGTTTTTTTGGAGTGCACTGGATTGGATTTGGTTCACACCAAAAAGAATAGAGAAACGTTTGAAACAACAAGGTCTTAAAGGAAATTCATATCGAATCATGGTTGGAGATATTAGAGATATGGTGAAAATGATCAAAGAAGCTAAATCTAAACTCATGGACCCTTACTCTAATGATATTGCTCCTCGTGTTTTGCCTTTTGTTGTTCATACTATTGCAAAATATGGGAAGAGTTCATTTATGTGGCTTGGACCAAGACCTAGGATATTCATAATGGATCCAGATAAAATCAAAGAAATGACTACAAAGGTATATGATTTTCAAAAACCAGACATAAGTCCACTATTCAAACTTCTAGCATCAGGCTTTGCAAATTTAGATGGAGACAAATGGGCCAAACACAGAAAAATTGTCACCCCTGCATTCAATGTTGACAAAATGAAGATGTTGATACCAATATTTTGCCAATCATGCGATGATATGATAAGCAAATTGGACAAAGTTGTAGCTTCATCCAATGGGTCATGTGACTTAGATGTATGGCCTTTTGTCCAAAATGTTTCAAGTGATGTTCTAGCTCGTGCTGGCTTTGGAAGTAGCTTTGAAGAAGGAAAAAGAGTTTTTCAACTTCAAAAAGAAATGATCACACTTACAATGACCCTTTTCAAGTTTGCTTTCATTCCAGGTTACAGGTTTTTGCCAACTTATACCAACAGAAGGATGAAAGCAATTGACAAAGAAATAAGAACATCACTAATGAAAATCATAGACAGAAGACTAAAAGCAATAAAAGCAGGAGAGCCTACAAACAATGACTTATTAGGCATACTTTTGGAATCAAATTATAAGGAAAGTGAAAAGGCTAATGGTGGTGGAGGAATGAGTTTAAGAGAAGTGATTGATGAAGTTAAGCTATTTTATCTGGCTGGACAAGAAGCAAATGCTGAATTGCTTGTTTGGACTTTGTTATTACTTGCCAAGAATCCTGAATGGCAAACAAAAGCAAGGGAAGAAGCTTTTCAAGTTTTTGGTCATGAAAATCCAGATTATGAAAAGATTGGTCAACTTAAAATTATATCAATGATTCTCCAAGAGAGTCTAAGGCTATATCCACCAGTTATCATGCTATCTCGATACCTTCGCAAAGACACAAAACTCGGAGACCTAACACTTCCCGCGGGAGTCGAACTGATAGTACCTGTATCAATAATGCACCAAGAAAAGGAATTTTGGGGTGACAATGCTGGAGAGTTCAATCCAGAAAGATTCTCTGAAGGAGTTTCAAAGGCAACAAATGGCAAAGTTTCTTACTTGCCATTTGGATGGGGTCCTAGGCTTTGTATTGGTCAAAACTTTGGTTTATTAGAAGCTAAAATTGCTGTGGCTATGATTCTTAGAAAATTTTCTTTAGAGTTTTCAACTTCATATACACATGCTCCTTCCTTTATTATTACTCTTCAGCCTGAGCATGGTGCACATCTTATTTTGCATAAACTTTAG 1587 0.3598 MESLGTLLSSLSLKPTKVAVITVIITVLIWFFWSALDWIWFTPKRIEKRLKQQGLKGNSYRIMVGDIRDMVKMIKEAKSKLMDPYSNDIAPRVLPFVVHTIAKYGKSSFMWLGPRPRIFIMDPDKIKEMTTKVYDFQKPDISPLFKLLASGFANLDGDKWAKHRKIVTPAFNVDKMKMLIPIFCQSCDDMISKLDKVVASSNGSCDLDVWPFVQNVSSDVLARAGFGSSFEEGKRVFQLQKEMITLTMTLFKFAFIPGYRFLPTYTNRRMKAIDKEIRTSLMKIIDRRLKAIKAGEPTNNDLLGILLESNYKESEKANGGGGMSLREVIDEVKLFYLAGQEANAELLVWTLLLLAKNPEWQTKAREEAFQVFGHENPDYEKIGQLKIISMILQESLRLYPPVIMLSRYLRKDTKLGDLTLPAGVELIVPVSIMHQEKEFWGDNAGEFNPERFSEGVSKATNGKVSYLPFGWGPRLCIGQNFGLLEAKIAVAMILRKFSLEFSTSYTHAPSFIITLQPEHGAHLILHKL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04939 528 SUPERFAMILY Cytochrome P450 92 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 Gene3D Cytochrome P450 38 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Vifa2g04939 528 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 PANTHER CYTOCHROME P450 FAMILY MEMBER 30 521 - -
Vifa2g04939 528 CDD CYP72 94 524 - -
Vifa2g04939 528 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04939 528 FunFam Cytochrome P450 734A1 40 528 - -
Vifa2g04939 528 Pfam Cytochrome P450 101 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04939 Vifa-Chr2 1469243888 1469246552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04939 20 528 Cytochrome P450 AT3G14690 51.081 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04939 - K24179 gmx:100801959 889.026