Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04931 ATGACAACCGTTGGATATGGCGATCTCGTTCCTAATAGTACTATAGCGAAACTACTTGCTTGCCTTTATGTCTTCACTGGTATGGCTCTTGGTGGCTTGATTCTTAGCAAAGCAGCAGATTACATTGTTGAAAAACAAGAAGTGTATCTTGTTAAAGCAATATGCAAAGCCGAGAAACTCGGTCTAGAAGAGGTTTCTAAAGAACTTGTGACTAAGAAAAGCAAATACAAGTTTCTGCTTTCAATATCCACTTTTGTTGTACTCATGATTACAAGAACTGTTTTTTTGTATTTTGTTGAGAAACTAGATTTCGTCGATGCATTCTATTGTGTTTGTTCGACGGTTACGACTTTAGGTTACGGATATAAGAGCTTCTCAACTCCTATTGGTAGGACTTTTGCTGTGTTTTGGATATTAAGCAGCACCATTTGCTTGGCTCAGTGTTTTGCATATCTTGCTGATTTTTATACGGAAGATATACAAAGATCATTGGCGAAAATGGTTCTCACGCGAAATTTTTATATGCATCATTCACTGGGATTGTATACTTTTCTTAATTTGTCGCGTATAATCAACGACAACAACAAAACACCAACACAGACATGTCTATAG 612 0.3676 MTTVGYGDLVPNSTIAKLLACLYVFTGMALGGLILSKAADYIVEKQEVYLVKAICKAEKLGLEEVSKELVTKKSKYKFLLSISTFVVLMITRTVFLYFVEKLDFVDAFYCVCSTVTTLGYGYKSFSTPIGRTFAVFWILSSTICLAQCFAYLADFYTEDIQRSLAKMVLTRNFYMHHSLGLYTFLNLSRIINDNNKTPTQTCL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04931 203 Gene3D - 1 48 - -
Vifa2g04931 203 SUPERFAMILY Voltage-gated potassium channels 1 47 - -
Vifa2g04931 203 Gene3D - 59 165 - -
Vifa2g04931 203 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 1 171 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vifa2g04931 203 Pfam Ion channel 1 43 IPR013099 -
Vifa2g04931 203 Pfam Ion channel 85 157 IPR013099 -
Vifa2g04931 203 SUPERFAMILY Voltage-gated potassium channels 71 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04931 Vifa-Chr2 1466283429 1466284040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04931 1 171 Ion Channels AT5G55630 59.064 1.21e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04931 K05389 - gmx:100799492 261.151