Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04863 ATGTTGTTGTTCCTCCTGGAAACACAAGGCTCGATTCATCCTAGACCTCTTTCTTCTAGGTTCTCAACATTCCCACAAGGAATTAACAAGGGTACTATTGTAATCATCACCCCTGTTGAACTTGTCAAGAAGGGAGACAAGGTGGGATCTTCTAAAGCTGCTTTACTTGCCAAGCTGGGAGTTAGGCCCTTTTCATATGGTCTTGTGGTCCTCTCTGTCTATGACAATGGCTCTGTGTTTAGACCTGAGGTTCTCGATCTTACTGATGATGACCTTGTTACAAATTTTTCTATTGGTGTGTCCATGGTTACTTCACTTTCCTTGGCCATTTCATATCCCACACTGGCTGCTACTCCTGCAGATATAACTTATGCTGAACCAGCTGCTGCTAAGGAGCAGAAAAAGGAAGAAGGCTTACTTCAGAGCGAATTTGTGCCACTGAGAGATATCTTCTGA 456 0.4364 MLLFLLETQGSIHPRPLSSRFSTFPQGINKGTIVIITPVELVKKGDKVGSSKAALLAKLGVRPFSYGLVVLSVYDNGSVFRPEVLDLTDDDLVTNFSIGVSMVTSLSLAISYPTLAATPADITYAEPAAAKEQKKEEGLLQSEFVPLRDIF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04863 151 Gene3D - 12 66 IPR043164 -
Vifa2g04863 151 Gene3D - 67 90 IPR043141 -
Vifa2g04863 151 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 25 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04863 Vifa-Chr2 1445551945 1445552400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04863 23 119 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 78.351 4.12e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04863 K02941 - oeu:111372935 151.754