Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04838 ATGTTCCATTCTCACCGTCTCAAAGCTGTTGTCTACCTCAACCATCTTTCTTCAACTCCAAAATCTCACCACCTTCTTCACTCTCTCAATCCCTTCTCCACCACTTCAGATTCCTTCACCCTATCCTACTTCACCAACAACTGTGGCTTATCTCCACAAGACGCTCTCAAAGCCTCAAAACGACTCCGTCTCACTTTCACCACACCCGAAAAACCCAACTCCGTTATCGCCTTCTTCAAAACCCATGGTTTCTCCATTCCCCAAATCCAATCCATCATTCTCAAGAACCCCCAACTCATCCTCTCCAACCCCACCAAAACCATTCTCCCTAAGTTTCAATTTTTAGCCTCCAAAGGCGCTTCTCCCTCCGACATAGTCGCCGCCGTCACCAGAAGCTCTCGTTTCCTCCGTGTAAGCCTCGAGAAACATATTATCCCTGCTTTTCAGTTGGTGGCATTGGCAACAGCAGCAAAAGCAAAATTACTTCTTCGTGAGCTAAAAACCGTTAAAGCGGATTTAGCATTTGCTAAAGCGCGCTGTGCTCAACTTGAAGAAGAAAATAAATTACTCAGGGAACGAGAAGGAAGCGATAAGGGACTTATCCGTGATGATGATGATCTGATGATGATACAGCCAATGCGAAAGCGTTCCAGAGACAGGCCTCGTAAGTCAGAAACTGATGATGCAGACTGGCCAGAGAAGCCATTGCTGCTAACACAGGGACCAACCAAAAACAAGAGGTATCAGAACGGTCAAACTAGAGGTCCAGGGAGGCCTCCTAGGGTAATTCAAGATACTGAACAATGTGAAGATAAGTTAAAGAAAAAAGAAGAGAAGTTAAGGAAGAAAGAAGAGAAGTTGAAGAAAAAAGAAGAGGAGTTAATGAAAAAAGATCAAGCTAAGCTGCATGACCGTGAAGAGAAATTAAAGAAAAAAGATGAAGCTAAGTTGCATGACCGAGAAGAGAAATTAAAGAAAAAATATGAAGCTAAGCTGCATGACCGTGAAGAGAAATTAAAGAAAAAAGATGAAGCTAAGTTGCATGATTGTGAAGAGAAATTAAAGAATGAAAATCAAGCTGGTCGTGGTCGAGGTCGTGGACGAGGTCGTGGTCGTGGTCAAGGTCAAGGGAGGGCTCCTAAGCCCAAGGTATGTGATACTGATGCACCAGTTGCTGAAGCCACAACCATTTGA 1194 0.4397 MFHSHRLKAVVYLNHLSSTPKSHHLLHSLNPFSTTSDSFTLSYFTNNCGLSPQDALKASKRLRLTFTTPEKPNSVIAFFKTHGFSIPQIQSIILKNPQLILSNPTKTILPKFQFLASKGASPSDIVAAVTRSSRFLRVSLEKHIIPAFQLVALATAAKAKLLLRELKTVKADLAFAKARCAQLEEENKLLREREGSDKGLIRDDDDLMMIQPMRKRSRDRPRKSETDDADWPEKPLLLTQGPTKNKRYQNGQTRGPGRPPRVIQDTEQCEDKLKKKEEKLRKKEEKLKKKEEELMKKDQAKLHDREEKLKKKDEAKLHDREEKLKKKYEAKLHDREEKLKKKDEAKLHDCEEKLKNENQAGRGRGRGRGRGRGQGQGRAPKPKVCDTDAPVAEATTI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04838 397 Coils Coil 318 360 - -
Vifa2g04838 397 Coils Coil 263 308 - -
Vifa2g04838 397 Coils Coil 159 193 - -
Vifa2g04838 397 MobiDBLite consensus disorder prediction 194 232 - -
Vifa2g04838 397 MobiDBLite consensus disorder prediction 194 264 - -
Vifa2g04838 397 MobiDBLite consensus disorder prediction 281 397 - -
Vifa2g04838 397 PANTHER UNCHARACTERIZED 151 211 - -
Vifa2g04838 397 SMART mt_12 126 158 IPR003690 GO:0003690|GO:0006355
Vifa2g04838 397 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Vifa2g04838 397 Gene3D Transcription termination factor 3, mitochondrial 51 201 IPR038538 -
Vifa2g04838 397 MobiDBLite consensus disorder prediction 281 364 - -
Vifa2g04838 397 Pfam mTERF 77 152 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04838 Vifa-Chr2 1435126073 1435131785 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa2g04838 mTERF 4.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04838 K15032 - psat:127105073 192.2