Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04820 ATGGCATTCCAATTGCATAATCTCTTCAAACTAACATTCACCCTTGTATTCATCTCAACTCTAATTCAATCCACAGCATCTACATGCACCAACACCACCACCACCACAAATTCCACATCAACAACCTACAAAAAATTCTTAAAGAACCAATGCAACTCAACCACATACCCTAATGTTTGCTACAAGTCACTCTCCCCATACACGTCAAAAATCAAAACAAACACTTTCACCCTCACCAAAATCTCCATCTACCTAGCTCTAAAATCGGCCAGAAGTGCATCAATCACATTGAAAAACCTAAGCTCCAAGAAACTAACACATGTCGAAACATTGGTTATCGCCGATTGCAGCGAAAACGTTGACGACACGGTGGATTCGCTCGAGCAATCGGCGGTTGGGCTCGTGCATTTGAATGGTACTAGAACTAGTGATGAGAAGTTTCAATGGGATACAATAAAGACATGGATGAGTTCGGCTATAACAAATGCAGGGACATGTACGGATGAGTTTGATGAAATGGAAGTGAGATCTTCGGTGCAAAAGATGATTAAAATAAGTGTTGGTAAGCTTGCTTCATTGACTAGTAATGCTCTTGCTTTTGTAAATAGACTTGACTATTAA 621 0.401 MAFQLHNLFKLTFTLVFISTLIQSTASTCTNTTTTTNSTSTTYKKFLKNQCNSTTYPNVCYKSLSPYTSKIKTNTFTLTKISIYLALKSARSASITLKNLSSKKLTHVETLVIADCSENVDDTVDSLEQSAVGLVHLNGTRTSDEKFQWDTIKTWMSSAITNAGTCTDEFDEMEVRSSVQKMIKISVGKLASLTSNALAFVNRLDY 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04820 206 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 205 IPR035513 -
Vifa2g04820 206 SMART PMEI_2 42 200 IPR006501 GO:0004857
Vifa2g04820 206 CDD PMEI-like_3 51 205 - -
Vifa2g04820 206 Pfam Plant invertase/pectin methylesterase inhibitor 46 199 IPR006501 GO:0004857
Vifa2g04820 206 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 200 - -
Vifa2g04820 206 NCBIfam pectinesterase inhibitor domain 25 204 IPR006501 GO:0004857
Vifa2g04820 206 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04820 Vifa-Chr2 1431194057 1431194677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04820 26 204 Carbohydrate Esterase AT1G53830 32.240 6.91e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04820 - - cam:101501841 303.908