Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04814 ATGGAAGCACTTTCTTCGAAGTTCCTTCTCATATTTTTTTCCTTTAGTTTCATGATACACTCTATCCAAGCAACAGAAACCAAAACCTTATTCATTAGAAACTCTTGCAGTTCCACAACTTATCCAAGCTTATGTTATGCATCCTTAGTGAAGCACGCAGATTCCATTCAAACAAATCGCACGCTTTTAACAAGCACGGCTCTAAACGTGACTCTTGCATCCGCGAAATCAACCTCGGCTTTCATGTCAACGCTCTCTAGAAGCCGCGGTGTGAAGCCAGGAGAGGTTGCAGCTATGAAGGATTGTGTCGAAGTGTTGAGTGACTCGGTCGATGAACTCGGGAGGTCTATTGGTGAGATGAGTCGTCTTAGGACTTCAAATTTTGAGCTAACAATAAGTGATGTACAAACTTGGGTTAGTGCTGCTTTGACGGATGAGAGCACTTGTACCGACGGATTTCAAGAGATTAATGCACAGGACAATATTCAGACACTAGTGAGAGGGAAAATTGTGCAAGTGGCTCAATTGACTAGCAATGCTTTGGCTTTGATAAATAAACTTGCCACTTCGCATGGTTAA 579 0.4249 MEALSSKFLLIFFSFSFMIHSIQATETKTLFIRNSCSSTTYPSLCYASLVKHADSIQTNRTLLTSTALNVTLASAKSTSAFMSTLSRSRGVKPGEVAAMKDCVEVLSDSVDELGRSIGEMSRLRTSNFELTISDVQTWVSAALTDESTCTDGFQEINAQDNIQTLVRGKIVQVAQLTSNALALINKLATSHG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04814 192 SMART PMEI_2 27 183 IPR006501 GO:0004857
Vifa2g04814 192 Pfam Plant invertase/pectin methylesterase inhibitor 31 183 IPR006501 GO:0004857
Vifa2g04814 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 183 - -
Vifa2g04814 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 187 IPR035513 -
Vifa2g04814 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 189 IPR035513 -
Vifa2g04814 192 NCBIfam pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
Vifa2g04814 192 CDD PMEI-like_3 35 189 - -
Vifa2g04814 192 FunFam Pectinesterase inhibitor 3 27 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04814 Vifa-Chr2 1428221496 1428222074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04814 23 187 Carbohydrate Esterase AT3G14310 29.885 1.23e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04814 - - psat:127105069 303.523