Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04803 ATGCCCAGGATGGACAATTGTAAAGATTTTCTAAGTTGGGTCGACCCTGATACGTCTCTCAATATTTTCAAGTGTCTGGATGATCCAGCAGATCTAGCCCGCGTCAGTTGTGTTTCACGATCTTGGAGAGACTTTGTGGTTGCAAACGGCCTTTCTAAGCAGTTGTGCTTGAGAATGTTTCCTCAATTATCAAGAGTTGCTTGTGTTGTTGAACTAAACCAGGACGGAGTGAAGGAACACTCAGAGGTTGGATCTAGCCAATCTAATGAATGTCTAGCTCTATGGAAAGATCATAGAGTCTATAGTTATCTTGCTAGATCCTGCTTATCTCCTGTTGCTATGGATTGCATAGATAAGGCAATCAGTGCTTCTAGCACTGATAATTTTCCTCAGGAGAGCATTGTTAATACTCTAGAGGAAAGAGACAACATTGCTGGTAGATTTTCCTATTGGTCGAGTAGCGGACAAAGCAATCCCAATGTGCCTGAGACATTAACATACCAGTTGGCTTCTCAAATATGTGTTATTACAGAAATCAATATTCAGCCTTTCCAAGCTCACTTTCAGATGGGGTCGCCAATATATTCAGCAAAATCTGTTAGGTTCAAAATGGGTCATCTTAAAGCCTCTTTAGATGATTTAACTGATGCGTTTGTATGGACCTATACATCTCCGGAGTTTCCAATGGCTCAGGTTTGTAACTTCTTATATCTTAGCTTGTTTCTATTTTTAGCCGGTCCAAAATGGGGACCATTTTCTTCATGGTGCTGTGCTTGGCTTGAAACCATAGGTCTTATTGCTGGGATAGGGACTCAGGCGTATGCAGGATCACAAACATTGCAGAGTATAATCCTACTCTCGACAGGCACGAATAAAGGCGGAGGGTACTTTGCCCCGAAATGGCTATTCTTATGTATGTACATTGGCCTCACTGTTATTTGGGCAGCATTGAACACATTTGCGTTAGAAGTTATCGCCTTCATCGATATAATTTCAATATGGTGGCAGGTTATTGGTGGAGCAGTGATAGTTATAATGTTACCTCTAGTGGCACTAACTACACAATCAGCTTCATATGTATTCACAAACTTTGAATTAGCACCTAATACAACAGGAATATCAAGCAAACCGTATGCGGTGATTCTATCGTTTCTTGTGAGCCAATATTCCCTCTATGGATACGATGCTGCAGCGCATCTAACCGAAGAAACTAAAGGCGCAGACAAGAACGGACCTATTGCAATACTAGGTAGTCTTGCCATCATTTCAGTATTTGGTTGGGCTTATATCTTGGCACTCACATTCAGCATTCAGGATTTCGCTTATCTTTATGATCCAAACAATGAGACTGCTGGAGCATTTGTGCCAGCACAGATATTGTATGATGCATTCCATGGAAGATATCACAATTCTGCAGGAGCAATAGTTCTACTATTTATAATTTGGGGTTCTTTCTTCTTTGGTGGACTTTCAATCACCACAAGCGCTGCCAGAGTCGTTTATGCACTGTCAAGAGGGAGTGCCGTTTTCGTTCCTATGGCGAAAATTGCATCCAAAGCACAAGGTTCCTACAAATGCTGTATGGCTATGGGCAGCAATATGCAATATACAAAGTTTGTTCTTCAGATTCAAATTCCAGGATGGATGAAGTTGTTAAGTCAAATGGCTTTAAAGCTTCCAGATGTGTCAAACCTTAAATCGCTCACAGTTCTGTGCAATGAGGACGGTGAAGCAAATTTTTTTGACAATATAGCCGATCCAGTGATCCGTAAGAGAGTGAAGGCATTGTCGCTATTTAGAAATGTAATCAGTACAAACAAATTATCAGAGTTTATCACTGAAAAAGTGTTCATGCGTCTCTTCTTCAACATGTTGTTTGATGAGAAAGAAGGACAGGTTGACCATATGAAAACTGCATGCATCGAGACCATTGCTTCTGTAGCTGGTCAGATGGGATGGAAGTCATACTATGCACTATTGGACAAATGTTTTCAGGGAACATCCAGGAGTCCAGACAAACAGAAACTCTACATACGCCTCGTCTGTTCTATTTTGGATAAATTTCACTTTTCAGAACTTTGTCACACTGAAGAACCTAAGAAAGCTTTGGTTGGTGTTTCTGACAAGGGGATAAGTGACATTGTTTCTTCAGTTAATTTAGGAAACTTTGGTGCATCTGATGTGAACACAGATATACAGACGTGCCTCTATAAAGTCGTGCTTCCTAAAATACAAAAGCTGATGGATTCTGATTCAGAAAAGGTCAATGTAAATATCAGTCTTGCTGCATTGAAACTACTTAAGTTACTTCCAGGTGATGTGATGGACACATATCTTCCAACTATCATTCATCGAATTTCAAACTTCTTAAAGAGTCGTCTAGAAAGCATTCGTGATGAAGCTAGGTCTGCATTGGCTACTTGTTTAAAAGAGCTTGGATTGGAATACTTGCAATTCATTATTAAGGTTTTGCGATCTACCCTAAAGCGAGGATATGAACTTCATGTCCTAGGATACACACTGAATTTTATTTTGTCCAAGTGTCTCGCAAGTGCAGTTTGTGGAAAGATAGATTACTGTTTGGGGGATCTCCTTTCTATCATAGAGAATGACATTTTTGGAGCTGTTGCAGAGCAGAAGGAGGTGGAAAAGATAGCTTCAAAAATGAAAGAAACAAAGAAGAAAAAGTCATTTGAGAGCTTGAAATTGGTGGCCCAAAACGTAACATTCAAAAACAATGCTCTAAAGCTGCTTGCACCAGTGACTACTCATTTGAAAAAACATGTCACGCAAAATGTGAAAGGAAGATTGGAAAATATGTTGCATAGTATAGCTGCTGAAATCATGTCAAAAGTACAAAATGAACTCGAACAAGTTGTTGGCAAAGGTATTCCAGTCGAAGAAACAGACATAGCCAAATTACCATACATGCAAGCAGTTATAAAAGAGACGTTTCGTGTACATCCACCAGTTCCGTTATTACTACCTCGCAAAGCAGAAACAGATGTTGAAATTGGTGACTACATTATTCCAAAAGATGCACAAGTTTTGGTTAATGCTTGGGTTATTGGCAGAGATCCAAGTAAATGGGAGAATCCTAATGCTTTTGTGCCGGAGAGATTTTTCAATAGTGAGATTGATTTTAAAGGACATCATTTTGAGCTTATTCCATTTGGGTCTGGTAGAAGAATTTGTCCTGGTTTGCCTTTGGCTATTAGAATGTTGCCTTTGATGTTGGGATCTTTGGTTAATTGCTTTGATTGGAGACTTGAAGATGGATTGAATGTCGATGATTTGAATAAGGAAGATGAGTATGGGATTACCTTGGAAAAATCTCAACCTGTGAGAATTGTTCCAATCAAATTGACTAAGCAATAA 3378 0.3952 MPRMDNCKDFLSWVDPDTSLNIFKCLDDPADLARVSCVSRSWRDFVVANGLSKQLCLRMFPQLSRVACVVELNQDGVKEHSEVGSSQSNECLALWKDHRVYSYLARSCLSPVAMDCIDKAISASSTDNFPQESIVNTLEERDNIAGRFSYWSSSGQSNPNVPETLTYQLASQICVITEINIQPFQAHFQMGSPIYSAKSVRFKMGHLKASLDDLTDAFVWTYTSPEFPMAQVCNFLYLSLFLFLAGPKWGPFSSWCCAWLETIGLIAGIGTQAYAGSQTLQSIILLSTGTNKGGGYFAPKWLFLCMYIGLTVIWAALNTFALEVIAFIDIISIWWQVIGGAVIVIMLPLVALTTQSASYVFTNFELAPNTTGISSKPYAVILSFLVSQYSLYGYDAAAHLTEETKGADKNGPIAILGSLAIISVFGWAYILALTFSIQDFAYLYDPNNETAGAFVPAQILYDAFHGRYHNSAGAIVLLFIIWGSFFFGGLSITTSAARVVYALSRGSAVFVPMAKIASKAQGSYKCCMAMGSNMQYTKFVLQIQIPGWMKLLSQMALKLPDVSNLKSLTVLCNEDGEANFFDNIADPVIRKRVKALSLFRNVISTNKLSEFITEKVFMRLFFNMLFDEKEGQVDHMKTACIETIASVAGQMGWKSYYALLDKCFQGTSRSPDKQKLYIRLVCSILDKFHFSELCHTEEPKKALVGVSDKGISDIVSSVNLGNFGASDVNTDIQTCLYKVVLPKIQKLMDSDSEKVNVNISLAALKLLKLLPGDVMDTYLPTIIHRISNFLKSRLESIRDEARSALATCLKELGLEYLQFIIKVLRSTLKRGYELHVLGYTLNFILSKCLASAVCGKIDYCLGDLLSIIENDIFGAVAEQKEVEKIASKMKETKKKKSFESLKLVAQNVTFKNNALKLLAPVTTHLKKHVTQNVKGRLENMLHSIAAEIMSKVQNELEQVVGKGIPVEETDIAKLPYMQAVIKETFRVHPPVPLLLPRKAETDVEIGDYIIPKDAQVLVNAWVIGRDPSKWENPNAFVPERFFNSEIDFKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLVNCFDWRLEDGLNVDDLNKEDEYGITLEKSQPVRIVPIKLTKQ 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04803 1125 Gene3D - 3 103 - -
Vifa2g04803 1125 PRINTS E-class P450 group I signature 1055 1065 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04803 1125 PRINTS E-class P450 group I signature 612 630 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04803 1125 PRINTS E-class P450 group I signature 978 996 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04803 1125 PRINTS E-class P450 group I signature 1065 1088 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04803 1125 PRINTS E-class P450 group I signature 1019 1043 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04803 1125 Pfam Amino acid permease 249 505 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vifa2g04803 1125 Gene3D Amino acid/polyamine transporter I 240 531 - -
Vifa2g04803 1125 Gene3D Cytochrome P450 937 1124 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04803 1125 SUPERFAMILY ARM repeat 579 827 IPR016024 -
Vifa2g04803 1125 FunFam Uncharacterized protein 582 831 - -
Vifa2g04803 1125 Coils Coil 875 895 - -
Vifa2g04803 1125 Pfam F-box-like 19 58 IPR001810 GO:0005515
Vifa2g04803 1125 SUPERFAMILY F-box domain 6 63 IPR036047 GO:0005515
Vifa2g04803 1125 Pfam Cytochrome P450 947 1106 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04803 1125 Gene3D - 574 833 IPR011989 -
Vifa2g04803 1125 PANTHER UNCHARACTERIZED 547 946 - -
Vifa2g04803 1125 Pfam Domain of unknown function (DUF6700) 750 950 IPR046523 -
Vifa2g04803 1125 SUPERFAMILY Cytochrome P450 947 1118 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04803 1125 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1058 1067 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04803 Vifa-Chr2 1422952554 1422957183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04803 947 1121 Cytochrome P450 AT2G45570 55.429 3.09e-65 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04803 - K14772 gmx:100811612 615.535