Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04785 ATGAAACTATCTTCTTCATCTTCTCATCAACAAAACCAAGATGATAAAAGTAAACTTTCTAAGAAAATGAAGATATCAAACTCAATCAAACTCTCTCATCTTGAGACTCTTCAACTTCAATCAACACCAATTTCAACAAAAACAACAACAACAAAAGATGGTTCACCAAATTACATGAAGCACACAAGTAGTTCACAATCAAAAAAGGAACTTTTTCATGTAAGTCTTAGAAAAACTCAATCTTGCTCTGTTTCTAAGAATCTTGATACAAAATTTTCTAGTGATTATTCATGTAAAAAACCTAGTTTGAGTTTGGTTAGAACATTAACAAAAACTACTAGTTTTAAGGGTTCTAGAAATTCTCCTAGAAAATCAACAAGGGCTACTTGTTCTTCCACTCTGAAAGACTCAAACTTTCCATCATATCTTGAGCTTAATCATGGTGGAACTGAGTTAGAGGGAAGTTAG 468 0.3184 MKLSSSSSHQQNQDDKSKLSKKMKISNSIKLSHLETLQLQSTPISTKTTTTKDGSPNYMKHTSSSQSKKELFHVSLRKTQSCSVSKNLDTKFSSDYSCKKPSLSLVRTLTKTTSFKGSRNSPRKSTRATCSSTLKDSNFPSYLELNHGGTELEGS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04785 155 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 4 154 IPR044681 GO:0005516
Vifa2g04785 155 MobiDBLite consensus disorder prediction 1 25 - -
Vifa2g04785 155 MobiDBLite consensus disorder prediction 112 132 - -
Vifa2g04785 155 MobiDBLite consensus disorder prediction 40 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04785 Vifa-Chr2 1415447822 1415448289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04785 54 150 Calmodulin-binding Proteins AT2G38800 48.039 1.23e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04785 - - tpra:123913208 207.994