Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04759 ATGGCTTCAAACTCTGCTCTCTCTTCCTCCTCCCTCGCCAACCCTAAACTCTCTTTCTCTTCTTTTTCTTCTTCTTCCTCTGTCAACCCTTCTTTTTTCCACAACAAACTTCTTTTCTCAAACTCAAACTCAAACTCCAAAACCACACTTTCTCATTCCCGCAACCACAAACCACCCTCTGCATGCAACAACACCAACCCTAACACCACAGACACATTCCCTTTCCAAAACCTAACCGACGAAAAGCCTCGCGAAGAATGCGGCGTCGTCGGTATCTACGGCGACCCCGAAGCTTCTCGCTTATGTTATCTAGCTCTCCATGCTCTCCAACACCGTGGTCAAGAAGGTGCTGGAATTGTCTCCGTCAACAATAACATCCTCCGAACCGTCACCGGCGTTGGCCTCGTCTCCGAAGTTTTTAACGATACGAAACTCCGTCAATTACCGGGAACTTTAGCCATCGGTCATGTTCGTTACTCAACCGCAGGTCAATCTATGCTGAAAAACGTTCAACCTTTTGTTGCAGGTTACCGTTTTGGATCAGTCGGTGTTGCTCATAACGGTAATTTTGTTAACTACCGTTCCTTGAGAAACACGCTTGAAGAATCTGGTTCGATTTTCAATACTAGTTCTGACACTGAAGTTGTTCTTCATCTTATCGCGACATCGAATCAGAAGAGTTTTATAACTAGAGTTATTGATGCTTGTGAGAAATTGAAAGGTGCTTATTCGCTTGTGTTTGTTACTGAGAATAAACTTGTTGCTGTGAGAGATCCTTACGGTTTTCGACCTTTGGTTATGGGAAGAAGAAGTAATGGTTCTGTTGTTTTTGCTTCGGAGACATGCGCGCTTGATTTGATTGAAGCTAGTTATGTAAGAGAGGTTTATCCTGGTGAAATTGTGGTTGTGGATGAAACTGGTGTTCAATCTTATTCTCTGGTTTTTCATCCGGAACCGAAACAATGTATTTTTGAACATATTTATTTCTCACTGCCTAATTCTGTTGTTTTTGGGAAATCTGTTTATGAATCGAGAAGATTGTTTGGTGAGATATTGGCAACTGAGAATCCTGTTGATTGTGATGTTGTTATAGCGGTTCCTGATTCTGGTGTTGTAGCTGCACTTGGTTATGCTGCAAAAGCTGGTGTTCCTTTTCAGCAGGGTTTGATTAGGTCACACTATGTTGGAAGAACTTTCATTGAGCCGTCTCAGAAGATTAGAGATTTTGGTGTCAAGTTGAAGCTTTCGCCCGTTAGGGCTGTTCTGGAAGGGAAAAGGGTTGTGGTTGTTGATGATTCTATTGTGAGGGGAACAACATCGTCTAAAATTGTGAGGCTGTTGAAAGAAGCTGGTGCTAAAGAAGTTCATATGAGGATTGCATGTCCACCAATTATTGGGTCTTGTTATTATGGTGTGGATACACCTAGTCCTGATGAGTTGATATCTAATAGGATGAGTGTGGATGAGATTAAGGAGTTTATTGGTTGTGATTCACTTGCTTTTTTACCTATGGATAGCTTGAAGAAGCTGTTGGGTGATGATTCTTCTAATTTCTGTTATGCTTGTTTCACTGGGAATTATCCTGTTGAACCTAATGAACTCAAAGTCAAGAAGAAGGTTGTTGATGCTGGATTAAATGGATCTGTTCAAGCTAACCCAAATCAGAAGGAGGTGAAGATTGTTGGAGTTTGA 1692 0.4178 MASNSALSSSSLANPKLSFSSFSSSSSVNPSFFHNKLLFSNSNSNSKTTLSHSRNHKPPSACNNTNPNTTDTFPFQNLTDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVSVNNNILRTVTGVGLVSEVFNDTKLRQLPGTLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNFVNYRSLRNTLEESGSIFNTSSDTEVVLHLIATSNQKSFITRVIDACEKLKGAYSLVFVTENKLVAVRDPYGFRPLVMGRRSNGSVVFASETCALDLIEASYVREVYPGEIVVVDETGVQSYSLVFHPEPKQCIFEHIYFSLPNSVVFGKSVYESRRLFGEILATENPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIACPPIIGSCYYGVDTPSPDELISNRMSVDEIKEFIGCDSLAFLPMDSLKKLLGDDSSNFCYACFTGNYPVEPNELKVKKKVVDAGLNGSVQANPNQKEVKIVGV 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04759 563 Pfam Glutamine amidotransferase domain 165 284 IPR017932 -
Vifa2g04759 563 MobiDBLite consensus disorder prediction 44 77 - -
Vifa2g04759 563 SUPERFAMILY PRTase-like 322 533 IPR029057 -
Vifa2g04759 563 Gene3D - 346 510 IPR029057 -
Vifa2g04759 563 NCBIfam amidophosphoribosyltransferase 87 528 IPR005854 GO:0004044|GO:0009113
Vifa2g04759 563 MobiDBLite consensus disorder prediction 44 78 - -
Vifa2g04759 563 Pfam Phosphoribosyl transferase domain 344 457 IPR000836 -
Vifa2g04759 563 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 87 328 IPR029055 -
Vifa2g04759 563 CDD PRTases_typeI 344 482 IPR000836 -
Vifa2g04759 563 Hamap Amidophosphoribosyltransferase [purF]. 86 527 IPR005854 GO:0004044|GO:0009113
Vifa2g04759 563 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 87 528 IPR029055 -
Vifa2g04759 563 CDD GPATase_N 87 337 IPR035584 -
Vifa2g04759 563 PIRSF Pur1 83 543 IPR005854 GO:0004044|GO:0009113
Vifa2g04759 563 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 87 306 IPR017932 -
Vifa2g04759 563 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 85 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04759 Vifa-Chr2 1406030765 1406032456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04759 68 550 PRT Gene Family AT2G16570 80.328 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04759 K00764 - gmx:100791919 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04759 2 1406030765 1406032456 Vifa2g04759 2 1406030765 1406032456 ECH