Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04726 ATGCAATTCGGTAGCAAAATAACAATATGTTTGTTGATGATGATCATAATGTGGTGTTACAAAATTGAAGGTAGAGAGCCTGCGTTACATAGGGTTGGAGGTGGAAGGTATACTTGGCAACCAAAAGTTAACTTTAAGAACTGGACAAGTTATGAGCATTTCTACCAGGGTGATTGGCTATATTTTGGTTTTGATAAAACCATTCATAGTGTTCTTGAGGTTAACAAAACAAATTATGAGAACTGTATTGAAACGGATTTCATAGACAACATTACGAGAGGAGGAAGAGATGTTGTCCAACTCTCGGAGATGAGGATGTATTACTTTATATGTGGTAGAGGTTTCTGCTTCAATGGAATGAAGGTTGAAATAAATGTTGAACCAGATCTACCACTTTCTCCAACCATTTTCAACAAGGCTTCTTCCGCAAGAAAAATGAATGCCATTGTCATGCTTTTGTTTTCTGTAATAGGTTTAGCATGGATCTTCATATAG 495 0.3636 MQFGSKITICLLMMIIMWCYKIEGREPALHRVGGGRYTWQPKVNFKNWTSYEHFYQGDWLYFGFDKTIHSVLEVNKTNYENCIETDFIDNITRGGRDVVQLSEMRMYYFICGRGFCFNGMKVEINVEPDLPLSPTIFNKASSARKMNAIVMLLFSVIGLAWIFI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04726 164 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Vifa2g04726 164 PANTHER BLUE COPPER PROTEIN 30 139 IPR039391 GO:0009055
Vifa2g04726 164 FunFam Lamin-like protein 26 129 - -
Vifa2g04726 164 Gene3D - 28 130 IPR008972 -
Vifa2g04726 164 Pfam Plastocyanin-like domain 39 119 IPR003245 GO:0009055
Vifa2g04726 164 SUPERFAMILY Cupredoxins 29 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04726 Vifa-Chr2 1392493297 1392493873 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04726 10 159 Phytocyanin Superfamily AT2G27035 50.000 7.30e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04726 - - gmx:100789719 222.246