Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04714 ATGGCTCCAAAGAAGGAAAAGGCTCCTCCACCGTCCTCCAAGCCTGCAAAGTCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGTAAGCAGAAGGAGAAGGTGAATAACATGGTGTTGTTTGATCAGGGAACTTATGATAAGCTTCTCACTGAGGCTCCTAAATACAAGCTCATTACTCCTTCGGTTCTATCTGATCGTTTGAGGGTTAATGGATCACTTGCTAGGAGAGCAATAAGAGATTTGATGGCTAAAGGTTTGATCAGGTTGGTATCATCCCACTCGAGCCAACAGATTTACACCAGGGCTACAAACACCTAA 327 0.4557 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKYKLITPSVLSDRLRVNGSLARRAIRDLMAKGLIRLVSSHSSQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04714 108 FunFam 40S ribosomal protein S25 21 108 - -
Vifa2g04714 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Vifa2g04714 108 MobiDBLite consensus disorder prediction 1 36 - -
Vifa2g04714 108 Gene3D - 21 108 - -
Vifa2g04714 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04714 Vifa-Chr2 1391118467 1391120029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04714 1 108 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 87.963 2.67e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04714 K02975 - ming:122063087 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04714 2 1391118467 1391120029 Vifa2g04714 2 1391118467 1391120029 ECH