Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04713 ATGAAAAGAAATTCTTCCTTTTCTTTTTCACTTGATATCACTCATAATATTCACTCTATCGTTTCTCCTTACTATTCTTCTTGGCAAAAATCTTTTGGGAAAATTTTCATATATTGGTTGGGGGTAGAACCATTTTTATACGTTGCAGATCCTGAATTCTTGAAGAAAATGTCTGGAAAAGTTATGGCCAAGAAATGGGGGAAACCAAGTGTCTTTAGAAAAGACAGAAAAGCAATATTTGGAAATGGTTTAGTAATGGCTGAAGGCGCCATATGGGTACATCATCGACATGTTATAGCTCCAACATTTACTCCAATTAATCTTAAGACAATGACAAACATGATGATTGATTCGACAAAGAAGATGATTAAAAGATGGGATTCCCAAATTAACTCCGGCCACCTTGAACTCGACCTTGAAAGAGAGATTGTAGCAACGGCGGGAGAAATCATAGCAAAAGCAAGCTTTGGAATGAACAATGAAAATGGAAAATTAGTTTTTGATCAACTAAGAACTTTGCAAATGACCCTTTTTAAGACGGATAGATATGTGGGGGTCCCCTTTGGAAAATTCTTTAATTTTGAGAAAACTTTAGAAGCTAAGAAAATTGGTGAACAAGTTGACAAGCTCTTGTTATCCATAATAGAAAGTAGGATGAATTCAAATGTTAAGAAACAACACGAACAAGATTTCTTGGGTCATTTGTTGAAGGAAAATAATGAGATTGATGGACAAATGAACAGGGCATTAACAAAAAAAGAGTTGATTGATGAGTGCAAGACACTTTTCTTTGGTGGATATGAGACAACATCACTTTCAATCACATGGACTTTGTTACTTCTAGCTTTGCATCAAGATTGGCAAGACCAATTGAGAGATGAAATTAAACAAGTTGTTGGTAATATTGAAAAACTTGATATCAACTTGCTTGCTGATTTAAAGAAGATGAAATGGGTGATGAATGAAGCACTTAGACTCTACCCACCTTCTCCAAATGTGCAAAGGCAAACAATGGAGGACATTCATATAGATAATGTAAAGGTTCCTAAAGGAACCAACATTTGGATTGATGTTGTAGCAATGCACCATGATGTTACATTATGGGGGAATGATGCCAATAAGTTCAAACCAGAGAGATTTATGAATGATGCAAATGGAGAATGCAACCACAAAATGGGATACTTGCCTTTTGGTTTTGGAGGGAGAGCATGTGTTGGTAGGAACTTGACTTTCATGGAGTATAAGATAGTGTTAACTTTACTTCTCTCTAAGTTTAAGTTTAAACTCTCCCCTAGTTATCACCATTTTCCTACTATCATGTTGACCCTTAGACCTAGTCATGGACTTTCTCTCATAGTTCAATCATTGTAG 1371 0.3559 MKRNSSFSFSLDITHNIHSIVSPYYSSWQKSFGKIFIYWLGVEPFLYVADPEFLKKMSGKVMAKKWGKPSVFRKDRKAIFGNGLVMAEGAIWVHHRHVIAPTFTPINLKTMTNMMIDSTKKMIKRWDSQINSGHLELDLEREIVATAGEIIAKASFGMNNENGKLVFDQLRTLQMTLFKTDRYVGVPFGKFFNFEKTLEAKKIGEQVDKLLLSIIESRMNSNVKKQHEQDFLGHLLKENNEIDGQMNRALTKKELIDECKTLFFGGYETTSLSITWTLLLLALHQDWQDQLRDEIKQVVGNIEKLDINLLADLKKMKWVMNEALRLYPPSPNVQRQTMEDIHIDNVKVPKGTNIWIDVVAMHHDVTLWGNDANKFKPERFMNDANGECNHKMGYLPFGFGGRACVGRNLTFMEYKIVLTLLLSKFKFKLSPSYHHFPTIMLTLRPSHGLSLIVQSL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04713 456 Gene3D Cytochrome P450 6 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 Coils Coil 288 308 - -
Vifa2g04713 456 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 448 - -
Vifa2g04713 456 SUPERFAMILY Cytochrome P450 19 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Vifa2g04713 456 PRINTS E-class P450 group I signature 274 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 PRINTS E-class P450 group I signature 254 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 PRINTS P450 superfamily signature 265 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 PRINTS P450 superfamily signature 318 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04713 456 Pfam Cytochrome P450 24 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04713 Vifa-Chr2 1391073965 1391076789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04713 13 456 Cytochrome P450 AT5G52400 56.854 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04713 - - gmx:100802882 651.744