Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04712 ATGGTTTTTGTTGCATTATCACAAATTCTCTTTGTACTCACTTCAATATTACTTGCTATATGTCTTTGTTTGCTCGCAACACTAACATATTTTTGGTGGATTTTGCCAAACCATAAACTTCAAAACCTTAAGAAATGTGGATTTGATGGGCCAATGCCAAGTTTTCCATTTGGAAACATTAAAGAAATGAAAAGAAATTCTTCCTTTTCTTTTTCACTTGATATCACTCATAATATTCACTCTATCGTTTCTCCTTACTATTCTTCTTGGCAAAAATCTTTTGGGAAAGTTTTCATATATTGGTTGGGGGTAGAACCATTTTTATACGTTGCAGATCCTGAATTCTTGAAGAAAATGTCTGGAAAAGTTATGGCCAAGAAATGGGGGAAACCAAGTGTCTTTAGAAAAGACAGAAAAGCAATGTTTGGAAATGGTTTAGCAATGGCTGAAGGCACCATATGGGTACATCATCGACATGTTATAGCTCCAACATTTACTTCAATTAATCTTAAGACAATGACAAACATGATGATTGATTCGACAAAGAAGATGATTAAAAGATGGGATTCCCAAATTAACTCCGGCCACCTTGAACTCGACCTCGAAAGAGAGATTGTAGCAACAGCGGGAGAAATCATAGCAAGAGCAAGCTTTGGAATGAACGATGAAAATGGCAAATTAGTTTTTGATCAACTAAGAACTTTGCAAATGACCCTTTTTAAGACGGATAGATATGTGGGGGTCCCCTTTGGAAAATTCTTTAATTTTGAGAAAACTTTAGAAGCTAAGAAAATTGGTGAACAAGTTGACAAGCTCTTGTTATCCATAATAGAAAGTAGGATGAATTCAAATGTTAAGAAACAACACGAACAAGATTTCTTGGGTCATTTGTTGAAGGAAAATAATGAGATTGATGGACAAATGAACAGGGCATTAACAAAAAAAGAGTTGATTGATGAGTGCAAGACACTTTTCTTTGGTGGATATGAGACAACATCACTTTCAATCACATGGACTTTGTTACTTCTAGCTTTGCATCAAGATTGGCAAGACCAATTGAGAGATGAAATTAAACAAGTTGTTGGTAATATTGAAAAACTTGATATCAACTTGCTTGCTGATTTAAAGAAGATGAAATGGGTGATGAATGAAGCACTTAGACTCTACCCACCTTCTCCAAATGTGCAAAGGCAAACATTGGAGGACATTCATATAGATAATGTAAAGGTTCCTAAAGGAACCAACATTTGGATTGATGTTGTAGCAATGCACCATGATGTTACATTATGGGGGAATGATGCCAATAAGTTCAAACCAGAGAGATTTATGAATGATGCAAATGGAGAATGCAACCACAAAATGGGATACTTGCCTTTTGGTTTTGGAGGGAGAGCATGTGTTGGTAGGAACTTGACTTTCATGGAGTATAAGATAGTGTTAACTTTACTTCTCTCTAAGTTTAAGTTTAAACTCTCCCCTAGTTATCACCATTTTCCTACTATCATGTTGACCCTTAGACCTAGTCATGGACTTCCTCTCATAGTTCAATCATTGTAG 1557 0.3558 MVFVALSQILFVLTSILLAICLCLLATLTYFWWILPNHKLQNLKKCGFDGPMPSFPFGNIKEMKRNSSFSFSLDITHNIHSIVSPYYSSWQKSFGKVFIYWLGVEPFLYVADPEFLKKMSGKVMAKKWGKPSVFRKDRKAMFGNGLAMAEGTIWVHHRHVIAPTFTSINLKTMTNMMIDSTKKMIKRWDSQINSGHLELDLEREIVATAGEIIARASFGMNDENGKLVFDQLRTLQMTLFKTDRYVGVPFGKFFNFEKTLEAKKIGEQVDKLLLSIIESRMNSNVKKQHEQDFLGHLLKENNEIDGQMNRALTKKELIDECKTLFFGGYETTSLSITWTLLLLALHQDWQDQLRDEIKQVVGNIEKLDINLLADLKKMKWVMNEALRLYPPSPNVQRQTLEDIHIDNVKVPKGTNIWIDVVAMHHDVTLWGNDANKFKPERFMNDANGECNHKMGYLPFGFGGRACVGRNLTFMEYKIVLTLLLSKFKFKLSPSYHHFPTIMLTLRPSHGLPLIVQSL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04712 518 Gene3D Cytochrome P450 31 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 SUPERFAMILY Cytochrome P450 80 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 510 - -
Vifa2g04712 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 Pfam Cytochrome P450 85 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04712 518 Coils Coil 350 370 - -
Vifa2g04712 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04712 Vifa-Chr2 1391013622 1391016616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04712 1 518 Cytochrome P450 AT5G52400 52.471 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04712 - - gmx:100802882 719.924