Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g04696 | ATGGTGGATCGTAGATTCATAGTTTGGTTTCTGCTATTGCTGTTGTTTCTGTGTTTTGAGGTAACATTGGAACAGATTGAGATTAAGCCATTGAGTTCACCTACAGAACGTGCAGCACTTCTTCAACTTCGAGCTTCTTTAGGTTTAAGAACCAAAGAATGGCCAAGAAAACCCGACCCTTGCTTAATCTGGATTGGTATTTCGTGTAACAATGGTCGTGTTGTTGGGATCAATATCTCGGGTTTTAGACGAACAAGAATTGGTAGAAGAAACCCTCAGTTTTCTGTTGATGCTTTGGTTAATTTCACCTTGTTGCAGTCTTTTAATGCCTCTGGTTTTTACCTACCTGGGGCTATTCCTGATTTGTTTGGGGTTAGTCTCGGTTCGCTTCGCGTGCTTGATCTCCGTTCTTGTTCAATTGGAAATGCTATTCCGAATTCTGTTGGGAATTTGACTAGGCTTACTGCTCTTTATCTTGCTGATAATAATCTTACTGGAATTGTTCCTGATAGTTTAGGTCAACTCTCGTCGCTTTCGGCTCTTGATCTCTCGGGGAATTCTCTTACGGGGATTATACCGGAGTCTTTTGGGTTTCTTGCGAATCTTTCTTCACTTGATTTGTCGGGGAATTTTTTCTCCGGGCCTGTTCCTTCGGGTTTAGGGAATCTTTCTAGGTTACAGTACTTGAACCTTTCTGGTAATAGCTTAAATTCATTGCCTGCACAATTGGGAGGTCTTGTTAGCTTGGTTGACCTTGATCTTAGTGAGAATTCTTTCTCCAGCGGTGTTTTTCCGGATTTGAGAGGGTCGGAGAACTTGCGGATTATTGTTCTGAGGAAAAATAATTTCACTGGTTCTTTGCCTGTTGAGTTGTGGTCATTGCCGAGACTGACGTTCGTAGATGTTTCTTCTAATAGCTTCAGTGGTTTGCTTCCGAATTCTAGTTCCTCTGTCGATTCTACTGTTGCGGTTCTAAATATATCGCATAACATGTTTTATGGAGGTCTTACACCTGTGCTTAGAAGGTTCAGTTTTGTTGATTTTGCAAACAATTATTATGAGGATAGGGGCCTCAGTTTTGATAATTTTGGACAACCGAATACGACAAAACCTGTAGAAGGTTCTGGGAAAAGTAATAAAACTAAGATTATATTGGCGGCAGTTTTGGGTGGACTTGGTTTACTTGCACTTTTGGCTTTGCTACTGGTACTGTTGCTTTTGTGCGCTCGTAAAAGGGGCAATTCAAGTCCAAGGGGAAATGGTGTGGGCCCTGCTCCTGCTGCAGGCAGTCCTCCGCCTCCCGGTGTATCGATAAACCTTGCAAATGTAGGAGACTCGTTTACGTATCATCAGTTGCTTCAGGCAACGGGAGATTTTAATGATGCAAATCTTATAAAACAAGGCCACACCGGGGATATCTTCAACGGTGTTTTGGAAAATGGGATTCCCGTTGTCATCAAAAGGATCGACATGCGATCTACGAAAAAGGATGCTTACCTATCGGAATTGGACTTTTTTAATAAGGTTTCTCATCCGCGATTTGTTCCCTTATTAGGTCACTGCTTAGAAAACGAGAACGAGAAGTTCCTGGTTTATAAACTTATGCCAAAAGGGGACTTGTCTAATTGCTTATTCTTCAAAAACACCACATCTGAAGATGGTACTTTGCAGTCATTGGACTGGATTACTAGATTAAAGATTGCTACTGGAGCCGCAGAGGCCATATCGTATCTGCATCATGATTGTATTCCACCTATTGTTCACAGAGATATTCAAGCGAGCAGTATACTTCTCGATGACAAGTATGAAGTTCGGTTAGGAAGTCTAAGTGAAGCCTGTACTCAAGAAGGTGATACCCATCAAAGTAAAATCACCCGGTTTCTGCGATTGCCTCAGTCCTCTGAACAAGGTGCATCTGGTTTACCAACATCTGTTTGTGCCTATGATGTTTATTGCTTTGGGAAAGTGTTACTTGAACTTGTGACTGGTAAGCTGGGTATTAGTGCATCAAGTGAGGGTGAATTGAAGGACTGGTTTGATCAGATTCTACCTTGCATTAGCATGTATGACAAGGAGCCCGTGACAAAAATCGTTGACCCATATCTAGTTGTGGACGAGGATTTCTTAGAAGAAGTGTGGGCAATATCCATTGTTGCCAGGTCTTGCCTAAACCCGAAACCTTCAAGACGACCCCCAATGAGATACGTTCTCAAGGCTTTGGAAAACCCTTTAAAAGTTGTAAGAGAAGAAAGTTCGAGTTCTGCGCGGCTTAAAGCAACCTCTTCTAGAGGCTCTTGGAACGCTACTTTGTTTGGTAGTTGGCGTCAGAGCTCGTCTGATGTAGCCACAAACCCTGCAGCTTCTGGTACAAAAATAGAAGGAGCAAGTAGTTTGAAGCTTTCAGCAACAAGTAGTTCATCCTCGCGGAGACGTCATTCAAATGAGATATGTCCCGAGCCATCATTTCGCTTACCTGATATAGAGAGGCTGGAGCATGAAGGAAGAGAGGCTTAA | 2514 | 0.426 | MVDRRFIVWFLLLLLFLCFEVTLEQIEIKPLSSPTERAALLQLRASLGLRTKEWPRKPDPCLIWIGISCNNGRVVGINISGFRRTRIGRRNPQFSVDALVNFTLLQSFNASGFYLPGAIPDLFGVSLGSLRVLDLRSCSIGNAIPNSVGNLTRLTALYLADNNLTGIVPDSLGQLSSLSALDLSGNSLTGIIPESFGFLANLSSLDLSGNFFSGPVPSGLGNLSRLQYLNLSGNSLNSLPAQLGGLVSLVDLDLSENSFSSGVFPDLRGSENLRIIVLRKNNFTGSLPVELWSLPRLTFVDVSSNSFSGLLPNSSSSVDSTVAVLNISHNMFYGGLTPVLRRFSFVDFANNYYEDRGLSFDNFGQPNTTKPVEGSGKSNKTKIILAAVLGGLGLLALLALLLVLLLLCARKRGNSSPRGNGVGPAPAAGSPPPPGVSINLANVGDSFTYHQLLQATGDFNDANLIKQGHTGDIFNGVLENGIPVVIKRIDMRSTKKDAYLSELDFFNKVSHPRFVPLLGHCLENENEKFLVYKLMPKGDLSNCLFFKNTTSEDGTLQSLDWITRLKIATGAAEAISYLHHDCIPPIVHRDIQASSILLDDKYEVRLGSLSEACTQEGDTHQSKITRFLRLPQSSEQGASGLPTSVCAYDVYCFGKVLLELVTGKLGISASSEGELKDWFDQILPCISMYDKEPVTKIVDPYLVVDEDFLEEVWAISIVARSCLNPKPSRRPPMRYVLKALENPLKVVREESSSSARLKATSSRGSWNATLFGSWRQSSSDVATNPAASGTKIEGASSLKLSATSSSSSRRRHSNEICPEPSFRLPDIERLEHEGREA | 837 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g04696 | 837 | Pfam | Leucine Rich Repeat | 129 | 151 | IPR001611 | GO:0005515 | |
Vifa2g04696 | 837 | MobiDBLite | consensus disorder prediction | 779 | 811 | - | - | |
Vifa2g04696 | 837 | SUPERFAMILY | L domain-like | 99 | 338 | - | - | |
Vifa2g04696 | 837 | Gene3D | Transferase(Phosphotransferase) domain 1 | 535 | 763 | - | - | |
Vifa2g04696 | 837 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 193 | 290 | - | - | |
Vifa2g04696 | 837 | Pfam | Protein tyrosine and serine/threonine kinase | 465 | 737 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa2g04696 | 837 | ProSiteProfiles | Leucine-rich repeat profile. | 225 | 247 | IPR001611 | GO:0005515 | |
Vifa2g04696 | 837 | MobiDBLite | consensus disorder prediction | 812 | 837 | - | - | |
Vifa2g04696 | 837 | Pfam | Leucine rich repeat | 153 | 210 | IPR001611 | GO:0005515 | |
Vifa2g04696 | 837 | Pfam | Leucine rich repeat | 221 | 258 | IPR001611 | GO:0005515 | |
Vifa2g04696 | 837 | FunFam | Predicted protein | 429 | 534 | - | - | |
Vifa2g04696 | 837 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 383 | 765 | - | - | |
Vifa2g04696 | 837 | Pfam | Leucine rich repeat N-terminal domain | 34 | 70 | IPR013210 | - | |
Vifa2g04696 | 837 | Gene3D | Phosphorylase Kinase; domain 1 | 437 | 533 | - | - | |
Vifa2g04696 | 837 | MobiDBLite | consensus disorder prediction | 415 | 434 | - | - | |
Vifa2g04696 | 837 | SUPERFAMILY | Protein kinase-like (PK-like) | 439 | 740 | IPR011009 | - | |
Vifa2g04696 | 837 | SMART | LRR_typ_2 | 151 | 174 | IPR003591 | - | |
Vifa2g04696 | 837 | SMART | LRR_typ_2 | 175 | 198 | IPR003591 | - | |
Vifa2g04696 | 837 | SMART | LRR_typ_2 | 223 | 246 | IPR003591 | - | |
Vifa2g04696 | 837 | SMART | LRR_typ_2 | 127 | 150 | IPR003591 | - | |
Vifa2g04696 | 837 | SMART | LRR_typ_2 | 294 | 317 | IPR003591 | - | |
Vifa2g04696 | 837 | SMART | LRR_typ_2 | 199 | 222 | IPR003591 | - | |
Vifa2g04696 | 837 | Gene3D | Ribonuclease Inhibitor | 33 | 195 | IPR032675 | - | |
Vifa2g04696 | 837 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 | 33 | 192 | - | - | |
Vifa2g04696 | 837 | MobiDBLite | consensus disorder prediction | 779 | 837 | - | - | |
Vifa2g04696 | 837 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 535 | 760 | - | - | |
Vifa2g04696 | 837 | Gene3D | Ribonuclease Inhibitor | 196 | 370 | IPR032675 | - | |
Vifa2g04696 | 837 | PRINTS | Leucine-rich repeat signature | 178 | 191 | - | - | |
Vifa2g04696 | 837 | PRINTS | Leucine-rich repeat signature | 223 | 236 | - | - | |
Vifa2g04696 | 837 | ProSiteProfiles | Protein kinase domain profile. | 459 | 745 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g04696 | Vifa-Chr2 | 1384967404 | 1384971698 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g04696 | 35 | 632 | Miscellaneous Gene Families | AT2G16250 | 52.553 | 0.0 | 643 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIV | Vifa2g04696 | PK_Tyr_Ser-Thr | 2.2e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g04696 | - | - | gmx:100805769 | 1152.89 |