Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04679 ATGGTTTATGTTTACATGCTTTTGTGCAGAACTTGGACAGGTCTTTGGACTGCTATGGGCAGCATAGGGAGGCTTTTTGAGCAGAAGTATAATGGAGATGATAATGAGAGCCACAGATTAGAATCTAAAGATGATGATGGTGGAGGTTTTAGCTATACTCCATTGAAGCTTCAATGTGAAGCTTTAATTAAGTACTTGGAAGGAGCTTTAGGCGAAGTTGGTACTCAAGTCGTTAAAAAAAAATCTCAAGAGCAATTTACAAGGGATGAGGATATACTTCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGTTAAGAATAGCTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGGGGGCAATTAAAATGCCGATGGCATAGAATAAATGGTTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATAGAAAGAAAAGTGGGACATCAGATAACGATATCATGGCCTCTGCACATGCTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTACGCATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAGTAACAAAGACTTCTGCTAGTGGGGCATCATCGACTAACTCAGATACACCTTCAAGTTACGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAACACAAGATGCAAGGAATAAAAGAGCAGCAGCAATGGAAAGACTAGCTCAAAGTAAGGAGGACGAGCTAGAATTAAAGGCAATGCAAATCATCATGAAAGACACTTCTACTATGAGTGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAATATGGATTGTAGTTAG 972 0.3837 MVYVYMLLCRTWTGLWTAMGSIGRLFEQKYNGDDNESHRLESKDDDGGGFSYTPLKLQCEALIKYLEGALGEVGTQVVKKKSQEQFTRDEDILLIQSWLNVSKDPIVGVDQKAESFWLRIAANYNQYRGQSREKLGGQLKCRWHRINGLVQKFVGCYKQAVNRKKSGTSDNDIMASAHAFFAQDEGTTFNLEYAWRLLKDEPKWMGESIGNSSKVTKTSASGASSTNSDTPSSYEFNSSSPMERPMGQKAAKRKGKAKEIPNATQDARNKRAAAMERLAQSKEDELELKAMQIIMKDTSTMSDSQRDIHEKYCNKMKKNMDCS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04679 323 Coils Coil 264 284 - -
Vifa2g04679 323 MobiDBLite consensus disorder prediction 247 270 - -
Vifa2g04679 323 PANTHER - 75 318 - -
Vifa2g04679 323 MobiDBLite consensus disorder prediction 206 270 - -
Vifa2g04679 323 MobiDBLite consensus disorder prediction 209 244 - -
Vifa2g04679 323 Pfam No apical meristem-associated C-terminal domain 188 307 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04679 Vifa-Chr2 1380271784 1380275985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04679 79 256 Glutathione S-transferase Gene Family AT5G41240 34.211 6.41e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04679 - - psat:127115199 410.994