Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04620 ATGGCGGGAGGAGGAGGCGGTGACGCCCGGCAGCTAGATGTGACTCCTACATGGGCTGTCGCTGCAGTTTGTGCGGTTATCGTTATCATTTCCATATTCTTAGAGAAAATCATACATAAATTTGCAAAGGTGTTTGAAGAGAAAAAGAAACATGCTCTTCTAGAAGCTCTTGAAAAGATTAAAGCTGAGCTTATGGTTTTGGGATTTATTTCATTGCTATTAACATTTGGGCAAAACTACATATCAAAAGTGTGTATTCCAATGAAGTATGGAACTACAATGTTGCCATGTCTTCCCATGCATGAGAGGGTGGGTGGTGCTCATCCAAACGAACTTGAGCCTGCAGCGACTGATCATGAGCCTGCAGCGACTGATCACGAACCTACAACAGCGGGGGAACACGAGTCTACAACAACGGCATCACATCATCGCAGGCTCTTATCATATGAACGTAGGGTTCTCTCTGGTGGTGGCGGAGGGCCGGGATGTAAGCCGGGGTATATTCCTCTTATTTCAGTGAGCGGGTTACATCAGTTACATATTTTCATTTTCTTCTTGGCTGTCTTCCATGTGATATTCAGTGCCATTACAATGACACTTGGTAGAGCAAAGATTAAAGGTTGGAAGGTATGGGAATCGGACCATATGGTTGATGAAGATGCCTTAAATGATCCTAGAAGATTCAGACTTACTCATGAGACATCCTTTGTGAGAGATCACAACAGTTTCTGGACAAAAACACCTGTTACCTTCTATTTTGTATGCTTCTTTCGACAATTTTTCAGATCGGTTCGAAAGGCTGACTACTTAACAATGCGACATGGATTTGTTTCTGTCCATTTAGCACCTGGAAGTAAGTTTGATTTTCAAAAATATATCAAGAGGTCATTAGAAGATGACTTCAAGGTAGTTGTAGGAATCAGTCCAATACTATGGGGATCAGTGGTGTTATTTTTGCTCGTAAATGTCCATGGTTGGCATGCCTCATTTTGGGTGTCTTTTCTTCCTCTAGTAGTGATTTTAGCTGTTGGAACAAAGCTTCAAGCAATTATTACTAGAATGGCACTTGACATAAAGGAAAGACATGCAGTAGTGCAGGGGATCCCTCTTGTACAAGTCTCTGACAAGTATTTTTGGTTTGAATGGCCCCAATTAAGTCTTTATCTCCTACATTATGTTCTCTTTCAGAATGCATTTGAGCTCACATTTTTCTGGTGGACATGGTATGAATTTGGGTGGGCTTCTTGCTTTTATGAGGATGACCATCTTATGATTATAAGAGTTGCTCTTGGGTTAGGTGCTCAATTTGTTTGCAGCTATGTCACACTTCCTCTCTATGCCCTAGTGACACAGATGGGATCAACAATGAAGAGATCGATATTCGACGAACAAACATCAAAGGCATTGAAAAACTGGCGAAACAAAGCAAAAGGACGGAGCGCGGAAACTCGAACATTAGGTGGTGGTTCAATCGGGTCAGCGGCGGAAGCGCCGTTAGAAGATGTAAACATAGACACAGAAACAGAATTGCAGGAGCGTGGAAACTCCACTATAGTAACCGGTGTGGATGGTGTTGATAACCGTGACCTTCTAACTGGACCATAA 1605 0.4243 MAGGGGGDARQLDVTPTWAVAAVCAVIVIISIFLEKIIHKFAKVFEEKKKHALLEALEKIKAELMVLGFISLLLTFGQNYISKVCIPMKYGTTMLPCLPMHERVGGAHPNELEPAATDHEPAATDHEPTTAGEHESTTTASHHRRLLSYERRVLSGGGGGPGCKPGYIPLISVSGLHQLHIFIFFLAVFHVIFSAITMTLGRAKIKGWKVWESDHMVDEDALNDPRRFRLTHETSFVRDHNSFWTKTPVTFYFVCFFRQFFRSVRKADYLTMRHGFVSVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPILWGSVVLFLLVNVHGWHASFWVSFLPLVVILAVGTKLQAIITRMALDIKERHAVVQGIPLVQVSDKYFWFEWPQLSLYLLHYVLFQNAFELTFFWWTWYEFGWASCFYEDDHLMIIRVALGLGAQFVCSYVTLPLYALVTQMGSTMKRSIFDEQTSKALKNWRNKAKGRSAETRTLGGGSIGSAAEAPLEDVNIDTETELQERGNSTIVTGVDGVDNRDLLTGP 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04620 534 PANTHER MLO-LIKE PROTEIN 1 9 492 IPR004326 GO:0006952|GO:0016020
Vifa2g04620 534 Pfam Mlo family 10 488 IPR004326 GO:0006952|GO:0016020
Vifa2g04620 534 MobiDBLite consensus disorder prediction 113 143 - -
Vifa2g04620 534 MobiDBLite consensus disorder prediction 108 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04620 Vifa-Chr2 1360842472 1360846056 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04620 10 534 MLO family AT2G33670 57.009 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04620 K08472 - gmx:100780855 802.357