Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04588 ATGACTCCCCCTTTCCAGAATTGTCTAGGGTGGATCCAGAGTTTGTTGAGGCGTATAGGGGTGATCAGGTGGGTCGTTCTTGTCAAACGACAAGGAAGAGAGGGTGGAAGAGTGAAATTGTTTCGTGTCGAGATAAAGGAAATTGGCCATGACTCCCCCTTTCTAGAATTGTCCAGGGTGGATCCAGAGTTTGTTGAGGCGTATAGGGGTGATCAGATTGAGGTTCGATATCTCCATAATCATGTCGATTTTACTACTGATGTTGATTCAAATTGTAACCCCATTATTAATTTTTCTGCGTCAATTGGTACTTCTGGCATTGATTTTGCTGTTAACGGGTGTGATGTTGATAAAATAAAGGATTTGTATGGAAACAATGTTCTTAGTGGTGGTTTAACTATTTTTCCCGGTATTGTAGATCATATGAGCAAAGATATCACTGCCCTGGCTCCTAGAAGCATGAAGATTAAGGTTGTTGCTCCACCAGAGATAAAGTATATTGTTTGGATCAGAGGATCGATCCTTGCATCCTACAACACCTTCCAACAGATGTGGATATCAAAGGGATAG 570 0.4158 MTPPFQNCLGWIQSLLRRIGVIRWVVLVKRQGREGGRVKLFRVEIKEIGHDSPFLELSRVDPEFVEAYRGDQIEVRYLHNHVDFTTDVDSNCNPIINFSASIGTSGIDFAVNGCDVDKIKDLYGNNVLSGGLTIFPGIVDHMSKDITALAPRSMKIKVVAPPEIKYIVWIRGSILASYNTFQQMWISKG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04588 189 Gene3D - 107 167 - -
Vifa2g04588 189 Gene3D - 168 188 - -
Vifa2g04588 189 PANTHER ACTIN 107 188 IPR004000 -
Vifa2g04588 189 Pfam Actin 108 188 IPR004000 -
Vifa2g04588 189 SUPERFAMILY Actin-like ATPase domain 107 188 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04588 Vifa-Chr2 1350983291 1350988371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04588 110 188 Cytoskeleton Gene Families AT5G09810 77.215 1.76e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04588 K10355 - atri:130802420 124.405