Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04529 ATGAGAGAAAATCCAATTTTACTAATGCTAATATTTTACTCTCTCTTGTTTTTTCTTGGAGAATCAACATCATCATTAACTCAACCAAAGAATGATAATCAAGTTTATATTGTTTATATGGGAGCTGCAAGTTCAACTAATGGAACTCTTCGCAAAGATCATGTCCATGTTTTGAACACTGTATTAAGAAAGAATGGTAAAGCTCTAATACACAATTACAAACATGGATTCTCCGGCTTCGCTGCTCGATTATCGAAAAATGAAGCAAACTCGATTGCTCAACAACCGGGAGTCGTGTCTGTGTTTCCGGATCCTATACTGAAGCTTCATACAACACGTTCTTGGGATTTTCTTAAAGCGGAAACTGAAATTATAATTGATAAGAGACTCTCTAGTTCTTCTCCGTCTTCTTCATCAGACGTTGTAATTGGCATGTTAGACTCAGGTATATGGCCAGAAGCAGAAAGTTTTTCTGATAAGGGAATGGATCCTATCCCAGCCAAATGGAATGGTACATGCATGAAATCAAGTGACTTCAACTCATCAAACTGTAATAGAAAGATAATAGGAGCAAGGTATTATCCTAATCCTGATGAGGATGATGCTGGGGCAAACACTCCAAGAGATACATTAGGTCATGGTACTCACACGGCCTCCACAGCTGCAGGGAATGCCGTGACTGGTGCATCATACTACGGTCTCGCGACAGGGACATCGAAAGGCGGGTCTCCTGAATCGAGATTGGCGATTTATAAAGTGTGCAATGTTGGATGCTCCGGCTCTGGCATCCTCGCCGCATTCGATGATGCCATTTCAGATGGAGTTGATGTGCTTTCGCTATCCCTTGGCAGGTCTCCGAGTATGCAACCTGACTTGACAACCGATGTGATTGCAATTGGGTCGTTCCACGCCGCGGAACGTGGCATTCTGGTTGTTTGCTCGGCTGGAAATTCCGGACCCGAACAAAATACGGTAGTTAATGATGCTCCGTGGATATTAACGGTTGCTGCCACCACCATTGATCGCGACTTTCAGTCCAATGTTCTCTTGAGTAATACCCAAGTTATTAAGGGTGAAGCTATAAATTTCTCCCCTCTTTCAAAATCATCTGATTATCCATTGATAACTGGAGAGACTGCCAAGACGACTACTGCTGACTTAGATGAAGCAAGGAAGTGTCACCCAAGTTCATTAGATGCAAATAAAGTCAAAGGAAAGATTGTTGTTTGTGATGGAATAAATGATGATTATACAACCTATGACAAAATAACGATAGTGGAAGAAGTTGGTGGATTAGGTCTTATTCATATTACTGACATAGAAGGAGCAGTGGCAAATAACTATAAAGACTTTCCAGCAACAGTGGTAAGACCGACCAATGCTTCCACATTACTCCAGTATGTCAATTCAACAAGCAATCCAATGGCAACAATTCTACCAACAATTACCGTCATGGATTATAAACCCGCGCCTATGGTAGCAGTTTTTTCTAGTAGAGGACCTTCTGCACTTTCAAAGAATATTATCAAGCCTGATATTGCAGCACCAGGTGTTACCATTCTTGCCGCGTGGATTGGAAATGACACAAAAATTGTTCCAAAAGGGGAAAAGCCTTCGCTATATAACCTTGAATCAGGAACTTCCATGTCATGCCCACATGTTTCAGGCCTTGCAGGCAGCATAAAATCTAGGAACCCAACTTGGAGTGCCTCTGCTATCAAATCAGCTATCATGACCTCTGCGACTCAAATTAACAATATGAAGGCGCCCATTACGACCGACTTAGGATCAATTGCAACACCTTTTGATTATGGCGCCGGGGAAATAACATCAACAGAACCATTTCAACCAGGGCTAGTTTATGAAACTAATACATTGGACTACTTGAACTACTTATGTTACATAGGATTTAACACAACCACAATCAAGGTTATCTCTAGAACTGTGCCGGATAGTTTCAGTTGTCCTAAGGATTCAACTTCTGGTCATATTTCCAATATGAACTATCCTTCCATAGCAATCTCCAACTTCAATGGTAAAGAAAGCGTGAATGTGAGTAGAACTGTTACGAATGTCGGTGAAGATGATGAAACAGTCTACTCCGCCATTGTCGATGCTCCCAATGGGGTGAAAGTCCAACTGATTCCGGAGAAACTACAATTTACAAAAACTAGCAAACAAATAACCTATCAAGTTATTTTCTCCTCTAGTTTAACTTCGTTGAAGAATGATCTGTTTGGATCTATTACATGGACTAATGGTAAACATAATGTTCGAAGTCCTTTTGTATTAAGTATGTAG 2301 0.409 MRENPILLMLIFYSLLFFLGESTSSLTQPKNDNQVYIVYMGAASSTNGTLRKDHVHVLNTVLRKNGKALIHNYKHGFSGFAARLSKNEANSIAQQPGVVSVFPDPILKLHTTRSWDFLKAETEIIIDKRLSSSSPSSSSDVVIGMLDSGIWPEAESFSDKGMDPIPAKWNGTCMKSSDFNSSNCNRKIIGARYYPNPDEDDAGANTPRDTLGHGTHTASTAAGNAVTGASYYGLATGTSKGGSPESRLAIYKVCNVGCSGSGILAAFDDAISDGVDVLSLSLGRSPSMQPDLTTDVIAIGSFHAAERGILVVCSAGNSGPEQNTVVNDAPWILTVAATTIDRDFQSNVLLSNTQVIKGEAINFSPLSKSSDYPLITGETAKTTTADLDEARKCHPSSLDANKVKGKIVVCDGINDDYTTYDKITIVEEVGGLGLIHITDIEGAVANNYKDFPATVVRPTNASTLLQYVNSTSNPMATILPTITVMDYKPAPMVAVFSSRGPSALSKNIIKPDIAAPGVTILAAWIGNDTKIVPKGEKPSLYNLESGTSMSCPHVSGLAGSIKSRNPTWSASAIKSAIMTSATQINNMKAPITTDLGSIATPFDYGAGEITSTEPFQPGLVYETNTLDYLNYLCYIGFNTTTIKVISRTVPDSFSCPKDSTSGHISNMNYPSIAISNFNGKESVNVSRTVTNVGEDDETVYSAIVDAPNGVKVQLIPEKLQFTKTSKQITYQVIFSSSLTSLKNDLFGSITWTNGKHNVRSPFVLSM 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04529 766 Gene3D Peptidase S8/S53 domain 140 628 IPR036852 GO:0004252|GO:0006508
Vifa2g04529 766 MobiDBLite consensus disorder prediction 195 219 - -
Vifa2g04529 766 FunFam Subtilisin-like protease SBT1.5 140 354 - -
Vifa2g04529 766 Pfam Fibronectin type-III domain 666 763 IPR041469 -
Vifa2g04529 766 FunFam Subtilisin-like protease SBT5.3 24 110 - -
Vifa2g04529 766 Gene3D - 341 485 - -
Vifa2g04529 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Vifa2g04529 766 Gene3D - 632 766 - -
Vifa2g04529 766 SUPERFAMILY Subtilisin-like 109 611 IPR036852 GO:0004252|GO:0006508
Vifa2g04529 766 ProSiteProfiles Serine proteases, subtilase domain profile. 114 616 - -
Vifa2g04529 766 FunFam subtilisin-like protease SBT1.5 341 485 - -
Vifa2g04529 766 Pfam Subtilase family 138 607 IPR000209 GO:0006508|GO:0008236
Vifa2g04529 766 Pfam Peptidase inhibitor I9 35 110 IPR010259 -
Vifa2g04529 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
Vifa2g04529 766 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Vifa2g04529 766 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Vifa2g04529 766 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Vifa2g04529 766 CDD PA_subtilisin_like 347 478 - -
Vifa2g04529 766 CDD Peptidases_S8_3 107 582 IPR034197 -
Vifa2g04529 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 763 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04529 Vifa-Chr2 1332299045 1332302691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04529 36 765 Subtilisin-like Serine Gene Family AT1G20150 53.163 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04529 K25898 - gmx:100820194 1107.43