Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04522 ATGGCGAAGGGTCCAGGTCTCTACTCTGACATCGGCAAGAAAGCCAGAGATCTTTTGTTCATGGATTACAACACTGACCAGAAGTTTACTCTCACTACTTATTCACCTAATGGAGTTGCTATAACCACCTCAAGTACCAAAAAGGGTGAGGTTTTTGTGGCTGATGTTAACACACAGTTGAAGCACAAGAATGTAACTACTGATGTCAAAAGGAAACACAGCAGCTTCTGCATCTTCCACCATTTCAGAATGATCGAGGGAGTAAACACAAAGGAAGAGGTTGCATGGTATGCTGGGAAACGGTTGGCATACATTTACAAGGCCAAGGTTAAAAGGGATGGTAGCCACTATAGGTGTATCTGGGGAAAGGTTACTAGACCTAATGGTAACAGTGGGGTAGTCCGTGCAAAGTTCACTTCAAATTTGCCACCAAAATCCACTACTACTGTTACGGAGAAAAGAGAAGACGAAGCAACAAGAAAACCATGCAGCAGAGAACCAACAACGACGACTCACAAGTGGAATCGATCTCCATCAAGAAAGCGTCCTGTCATAGCTGATGCAAATGTCAGCGGTGGAAATGAGAGAAGTATTAAATCACCGGCTAGAAGACCGTCCCCGTCGCCAGAGAAGAAAATGAAGAACGGGTCAAGGTTAGTTCGTGGAAGAGAATCCGGTTCCGTTGCAAACCGTAAAGTCAATGCAGGTCCAACCGGTGTTCGCCGTGACTCCGGTGAGGGTTCCGGCAGGAGGTCGAGGTCTCCTTCGTGTTCTCGTACAGTTGGAGTGTCGAGTAAAATAGGTGTCGGAGTTGGTCGGAAACAAGCTCCGGCGAAGAAGAGTGAGAGTGAAGAGGTTGGAGAGATAAACGACATCGTTTGTAATGTAACGGAGAAGAAGAGTGAGAGTGAAGAAGGTGAAGAGAAAAACGACATCGTTTCGCAGGTAGAGTCAATTGAAAACCCTCATGTTTCGATGGAGTGTTTTATTTTTCTATAG 999 0.4565 MAKGPGLYSDIGKKARDLLFMDYNTDQKFTLTTYSPNGVAITTSSTKKGEVFVADVNTQLKHKNVTTDVKRKHSSFCIFHHFRMIEGVNTKEEVAWYAGKRLAYIYKAKVKRDGSHYRCIWGKVTRPNGNSGVVRAKFTSNLPPKSTTTVTEKREDEATRKPCSREPTTTTHKWNRSPSRKRPVIADANVSGGNERSIKSPARRPSPSPEKKMKNGSRLVRGRESGSVANRKVNAGPTGVRRDSGEGSGRRSRSPSCSRTVGVSSKIGVGVGRKQAPAKKSESEEVGEINDIVCNVTEKKSESEEGEEKNDIVSQVESIENPHVSMECFIFL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04522 332 MobiDBLite consensus disorder prediction 149 167 - -
Vifa2g04522 332 MobiDBLite consensus disorder prediction 132 148 - -
Vifa2g04522 332 SUPERFAMILY Translation proteins 74 147 IPR009000 -
Vifa2g04522 332 Pfam Eukaryotic porin 4 70 IPR027246 GO:0005741|GO:0055085
Vifa2g04522 332 Gene3D translation elongation factor selb, chain A, domain 4 52 152 IPR038661 -
Vifa2g04522 332 PANTHER 60S RIBOSOMAL PROTEIN L35A 63 148 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vifa2g04522 332 MobiDBLite consensus disorder prediction 130 286 - -
Vifa2g04522 332 MobiDBLite consensus disorder prediction 205 219 - -
Vifa2g04522 332 Pfam Ribosomal protein L35Ae 85 148 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04522 Vifa-Chr2 1331005362 1331006465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04522 85 146 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 87.097 1.71e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04522 K02917 - tpra:123923174 221.861