Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04520 ATGTGCAAAATATATCAACAAGTTATCTCTTTCTCAAAAATAACAAATTCATTGCTGAAACTAGCACCAAATGTTACAGTTCCAGCATTCATAGCTTTTGGAGATTCGATAATGGATACTGGAAATAACAACCATATTAAAACAATTGTCAAGTGCAATTTCTCTCCTTATGGTCAAGATTTTGAAGGAGGGATTCCAACTGGTCGATTTTGCAATGGCAAAAATCCTTCAGATTTGATAGTTGAATATTTAGGCATTAAGGAGCTTTTACCAGCTTATTTGGATCCAAATCTAAAACCAAGTGACCTTCCTACTGGTGTATCCTTTGCTTCTGGTGCTTCTGGTTATGATCCTTTAACATCTAAAATTGTGTCGGTGATTTCAATGTCTGATCAACTAAAAATGTTCAAAGAATACATAGTGAAACTCAAAGATGTGGTGGGAGAAAAAAGAAAAAACTTTATCTTAGCCAACACACTTTTCCTTGTTGTAGCTGGAAGTGATGATCTTGCAAACACTTATTTTACTATTCGCACCCCACAACTACACTATGATGTTCCTGCTTATACTGATCTTATGGTCAATGAAGCCTCAAACTTCGTTAAGGAAATATATCATCTTGGAGCAAGAAAAATTGGAGTGTTCAGTGCAGCACCTATTGGATACTTACCATCACAGAGGACTTTAAGTGGAGGTTTATCTAGAAATATAAATGAGGAATACAATGAAGCAGCCAAGTTATTTAACTCCAAACTCTCAAAGCAAATGGATTATCTTCATTCTAGTTTGCCTAATAGTAGGGTTATTTATATTGATATTTACACCCCCCTAGTTGATATCATTATAAAGCCTCAAAAATATGGGTATAAAGTTGCAGATAAGGGTTGTTGTGGGACAGGAAAACTAGAAGTTTCAGTATTATGTAACCCTTTGGTTCCTGCTTGTGATAATAATAAGGAATATGTATTTTGGGACAGTTATCATCCTACAGAAAGTGTATACAGAACTCTTGTGGCTGAAGTTCTTCCAAAATATATGGATAGCTTGATATCATGA 1056 0.3485 MCKIYQQVISFSKITNSLLKLAPNVTVPAFIAFGDSIMDTGNNNHIKTIVKCNFSPYGQDFEGGIPTGRFCNGKNPSDLIVEYLGIKELLPAYLDPNLKPSDLPTGVSFASGASGYDPLTSKIVSVISMSDQLKMFKEYIVKLKDVVGEKRKNFILANTLFLVVAGSDDLANTYFTIRTPQLHYDVPAYTDLMVNEASNFVKEIYHLGARKIGVFSAAPIGYLPSQRTLSGGLSRNINEEYNEAAKLFNSKLSKQMDYLHSSLPNSRVIYIDIYTPLVDIIIKPQKYGYKVADKGCCGTGKLEVSVLCNPLVPACDNNKEYVFWDSYHPTESVYRTLVAEVLPKYMDSLIS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04520 351 Gene3D SGNH hydrolase 18 345 IPR036514 -
Vifa2g04520 351 CDD SGNH_plant_lipase_like 28 345 IPR035669 -
Vifa2g04520 351 Pfam GDSL-like Lipase/Acylhydrolase 31 337 IPR001087 GO:0016788
Vifa2g04520 351 FunFam GDSL esterase/lipase APG 19 346 - -
Vifa2g04520 351 PANTHER GDSL ESTERASE/LIPASE EXL3 26 340 - -
Vifa2g04520 351 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 30 41 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04520 Vifa-Chr2 1330947428 1330949850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04520 22 349 Pollen Coat Proteome AT1G75910 38.671 4.85e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04520 - - gmx:100793078 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07865 1 1227429563 1227431657 Vifa2g04520 2 1330947428 1330949850 PCT