Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04516 ATGCGAAAGCTTTTGACAACAGTGATCCTCTGTTTTATTTTCATGACTGTTGAACTAAGCTGGTGGTGGGAGGCTACTCCTCATCAATCGTACGGGTTTTATAGAATAGAGATTCTCGGTGATTTGATTTCTATCCAATTGATATGGCTGCTTGCCGGGACTATTGCATACGAAGCCATAGATAGACTCATTACTGGTTCTAAAAATATGGACAGGTTCATGATGTTTCTAGTCGCTGCATTTGGTCTTGTGGTTAACATAATCATGGCCACAGTCATGGGATTACAGTTTCTACTCATAATCTTACAAAAGATGAGCACCATCGTCATGCTCACGACAACCACACTCGCCATGACAAAGAAAATCATTCTGAACCTGCTTCCAAATCAGCCCTGCATAAGATGGAAAATAGAAAATCAATAA 423 0.4019 MRKLLTTVILCFIFMTVELSWWWEATPHQSYGFYRIEILGDLISIQLIWLLAGTIAYEAIDRLITGSKNMDRFMMFLVAAFGLVVNIIMATVMGLQFLLIILQKMSTIVMLTTTTLAMTKKIILNLLPNQPCIRWKIENQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04516 140 Gene3D Cation efflux protein transmembrane domain 1 124 IPR027469 -
Vifa2g04516 140 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 23 93 - -
Vifa2g04516 140 Pfam Cation efflux family 8 93 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vifa2g04516 140 SUPERFAMILY Cation efflux protein transmembrane domain-like 2 93 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04516 Vifa-Chr2 1329170415 1329170937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04516 1 93 Inorganic Solute Cotransporters AT2G46800 48.413 1.53e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04516 K14689 - gmx:100790458 125.946