Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04512 ATGTGTACCTTGCTGCTATGTTTCATGTTACTAGGAGGAGTTGTTTTTTACACAACTCATGCTATAAAATTTCCACCAAATGTTTCATTACCAGCAGTGTTTGCTTTTGGAGATTCAATCATGGATACAGGTAACAACAATAACATGAAAACATTTGCTAAGTGCAATTTTCCTCCTTATGGAAAAGATTTCAAAGGTGGCATCCCAACCGGTCGGTTTGGCAATGGAAAAGTTCCTTCAGACTTTTTGGTTGAAGTATTAGGTATTAAGGAATTTCTTCCTGCATATTTGGATCCAAATATTCAACCTAACGATCTTATCACCGGTGTTTGCTTTGCATCCGGTGGTACTGGATATGATCCTCTCACATCTCAATTAGCGGTAGCTATATCATTGTCCACTCAAATAGAAATGTTCAAAGAATACATAGGAAAGCTAAAAGGACTTGTAGGAGTGGATAGAGCAAACTTCATCATAGAAAATAGTATTTACCTTGTTGTTCAAGGAAGCAACGACATTTCAAATACATATTTTTTGAGTCATGTTAGAGAATTACAGTACGATGTTCCTGCTTACGCTGATCTCATGCTCACCGGCGCTATGGATTTCTTAAAGGAAATATATAAACTTGGGGCAAGAAAGATAGGAGTATTTAGTGCTCCACCAATAGGATGTGTGCCTTTTCAAAGAACAGTTGCTGGAGGAATTGAGAGAGAATGTGCAGAAAAAATCAACGATTTATGCAAGTTATTTAACACTAAATTATCAAAGGAGTTGACTTCTCTTAACCAAAACTTGATTAATTCAAGATTGGTTTACCTTGATGTTTATACACCTATTCTTGACATCATTGTAAATTATCAAAATTATGGTTATAAAGTTGGAGACAAGGGATGTTGTGGCACAGGTGAAGTAGAGGCATCAGTGTTATGCAATCAATTCTCTACTACGTGTGAAAATGCCAATGACTATGTTTTTTGGGACAGTTTTCATCCCACAGAGAGTGTCTATATAAAGCTTGTAGATTCTCTTATTCGAAAATATATGCACCAATTTCTCTAG 1062 0.3606 MCTLLLCFMLLGGVVFYTTHAIKFPPNVSLPAVFAFGDSIMDTGNNNNMKTFAKCNFPPYGKDFKGGIPTGRFGNGKVPSDFLVEVLGIKEFLPAYLDPNIQPNDLITGVCFASGGTGYDPLTSQLAVAISLSTQIEMFKEYIGKLKGLVGVDRANFIIENSIYLVVQGSNDISNTYFLSHVRELQYDVPAYADLMLTGAMDFLKEIYKLGARKIGVFSAPPIGCVPFQRTVAGGIERECAEKINDLCKLFNTKLSKELTSLNQNLINSRLVYLDVYTPILDIIVNYQNYGYKVGDKGCCGTGEVEASVLCNQFSTTCENANDYVFWDSFHPTESVYIKLVDSLIRKYMHQFL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04512 353 CDD SGNH_plant_lipase_like 31 348 IPR035669 -
Vifa2g04512 353 Gene3D SGNH hydrolase 23 349 IPR036514 -
Vifa2g04512 353 PANTHER GDSL ESTERASE/LIPASE EXL3 11 343 - -
Vifa2g04512 353 Pfam GDSL-like Lipase/Acylhydrolase 33 342 IPR001087 GO:0016788
Vifa2g04512 353 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 33 44 IPR008265 GO:0006629|GO:0016298
Vifa2g04512 353 FunFam GDSL esterase/lipase APG 22 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04512 Vifa-Chr2 1328539124 1328540657 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04512 1 346 Pollen Coat Proteome AT1G75910 39.828 1.11e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04512 - - gmx:100793604 533.102