Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04489 ATGTTAGATATCTTAGGGAATTCTAATATCGCAGCTGTTCATGGCTCTGCTCATAAGTTCTTGAGAGGAGCACTTTTATCACTTGTTAGCCCACAAATGTTAAGCGACATAGTTTTGCCAAGAATTAATCGCTTTATGATTTCTCAATTAAGTAATTGGGATGGCAAAATCATCGACCTTCAAGATCATACTAAAGAGATGATATTCCTCTCAATTATGGATCAGATTGCAAATGAAAATAAGTACAAACTAAATGATGATGAAATCCTTGACTTGGAACTTACACTTATGTATTCTGGTTATGAAACTGTTTCAACCACTTCTATGATGGCTCTCAAGTTTCGGCATGACAATCCCAAAGCTCTTGAAGAAATTAGAAAAGAGCATTTGGCAATAAAAGAGAGGAAAAAGCCTAATGAACCAATTGATTTTGATGATATTAAATCAATGAGGTTTACACATGCGGTGATTTTTGAGACATCTAGATTGGCCTCAATAGTTAATGGAGTTTTACGGAAAACCACTAAAGATGTTGAACTAAATGGCTATTTAATACCTAAAGGATGGAGAATATATGTCTATACAAGAGAGATAAATTATGACCCTTTTCTATATACTGAACCATTAACATTTAATCCATGGAGATGGATGGAGAAGAATTCGGAATCACACAATTACTTCTTGCTGTTTGGAGGTGGCACTAGACTTTGGAATTTTTTTTATTAA 726 0.3402 MLDILGNSNIAAVHGSAHKFLRGALLSLVSPQMLSDIVLPRINRFMISQLSNWDGKIIDLQDHTKEMIFLSIMDQIANENKYKLNDDEILDLELTLMYSGYETVSTTSMMALKFRHDNPKALEEIRKEHLAIKERKKPNEPIDFDDIKSMRFTHAVIFETSRLASIVNGVLRKTTKDVELNGYLIPKGWRIYVYTREINYDPFLYTEPLTFNPWRWMEKNSESHNYFLLFGGGTRLWNFFY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04489 241 Gene3D Cytochrome P450 1 236 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04489 241 Pfam Cytochrome P450 65 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04489 241 PRINTS E-class P450 group I signature 227 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04489 241 PRINTS E-class P450 group I signature 154 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04489 241 PRINTS E-class P450 group I signature 88 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04489 241 PRINTS E-class P450 group I signature 194 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04489 241 SUPERFAMILY Cytochrome P450 3 235 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04489 241 PANTHER CYTOCHROME P450 26 2 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04489 Vifa-Chr2 1320658904 1320660723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04489 1 78 Cytochrome P450 AT5G38970 54.430 2.88e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04489 K09590 - gmx:100805958 276.559