Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04431 ATGGCTTGTTCGGGTGGAAATTCTTCTGCTTCAACGAAATTCGGGAGTTCTGGATCTGAGAAGGAGTTGAACAATTTGATGGATGAGAGAAAAAACAAGAGGAAACAATCGAATCGGGAATCAGCGAAGAGATCTCGGATGAGGAAGCAGAAGCATGTTGATGATATGATGAATCAGGTATCTGATCTCACAAAAGAGAATAATGAGATTGTGCATAAGATAAATATCACAACACAGCACTATTTGAATGTTGAGGCTGATAATTCAATTTTGAGGGCCCAAATAGGTGAGCTAAGTCAAAGGTTTCAATCATTGAACAACATCATTGAACTCATCAACACTGCTAATAATGGGGCTGGGTCTGGGTCTGGGTCCTATGATTCAAGGGATTGTTATGAAACAAGTGCACAAAACATGATGAATATGATGGTGTATAATAATAACCAGCCCATTACCACTTCTGCAGATGTTTTTAAGTGGTGA 483 0.3913 MACSGGNSSASTKFGSSGSEKELNNLMDERKNKRKQSNRESAKRSRMRKQKHVDDMMNQVSDLTKENNEIVHKINITTQHYLNVEADNSILRAQIGELSQRFQSLNNIIELINTANNGAGSGSGSYDSRDCYETSAQNMMNMMVYNNNQPITTSADVFKW 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04431 160 Coils Coil 16 43 - -
Vifa2g04431 160 Gene3D - 28 110 - -
Vifa2g04431 160 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Vifa2g04431 160 MobiDBLite consensus disorder prediction 1 22 - -
Vifa2g04431 160 MobiDBLite consensus disorder prediction 1 54 - -
Vifa2g04431 160 Pfam bZIP transcription factor 30 80 IPR004827 GO:0003700|GO:0006355
Vifa2g04431 160 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Vifa2g04431 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 75 IPR004827 GO:0003700|GO:0006355
Vifa2g04431 160 FunFam BZIP transcription factor 28 79 - -
Vifa2g04431 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Vifa2g04431 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 14 154 - -
Vifa2g04431 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04431 Vifa-Chr2 1299826572 1299827054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04431 26 160 bZIP Transcription Factor Family AT4G34590 51.079 6.10e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vifa2g04431 bZIP_1 2.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04431 K25786 - jre:108991376 165.236