Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04390 ATGCAGTACGAGTACGAGAATTATGATCCATTCTTTCCCGACCAACCCGTGGTTGACCAATACCTCCCAGTTTGGACCAGGTTACCATCTTTCAAGTCCAAACCAGCTTTCATTTGGGCCGAAGATTACTTGAACACCATTTCCACTACTCACCTCACCTATGGAGAACTCAATACCTCAGTAGATATAATCTCAACTCAACTACTCTTTCCACTTCAAAGAGATGACACTGTCCTTATTCTTTGCTCTCCGGGGCTCGACCTCGTTAAGGTCATTTTCGGTTGTCAAAGAGCTGGTCTTTTAACTGTCCCTATAATCCCTCCTCACCCTTCTTTCACTAATGAAAAAAACTACCATCATCTCATTAGGGTCATCTCGCAAACTAAACCAAAAGCTGCCATAGCTCACCCCAATTACATTTCAACCATTCATCACTACATCACTTCATCCCACAACAATAAACTAGCTCACATGTTACAAACACTCCTCTGGATTTCCACGGACGACCTCAAGAACAGTAACATACATTCGAATTTAAGTTCAGATTCATACAATGGTCGTAAACCAGACGAGCTTTACTTGGTTCAGTACACATCAGGTGCAACTGGAATACCAAAACCGGTTCTCGTTACCACAGGTTCAGCCGCTCATAACGTTAGAACAGCAAGAAAAGCTTACGATCTTCATCCAAACAGTACTATCGTTTCATGGCTACCTCAATACCATGATTGTGGTCTCATGTTTCTGTTACTCACAATTGTATCAGGTGCGACGTGTGTTCTCACTTCTCCAACATCCTTCATCAAACGTCCGAGAATCTGGCTTGAGTTAATGTCGAAATTCAATGCTACATGCACTCCTGTTCCTTCTTTCACGTTACCACTTGTTGTCAAACGCGGAGGAATTCAAAAAGGAACTTTACCTATTAATCTATCAAATCTTAACAACCTTATACTCATCAATGAACCTATTTATAATGACTCAGTGGTTGAATTCGTTCACACTTTTTCGCCATTCGGGTTAAGAGCTTCGTCCATTTCACCTTCTTACGGATTAGCAGAGAATTGTACTTTTGTCTCAACTGCATGGAGGGATCATAACATAGAAGCCTATTCTAGCTTCTCGCATTTTCCAACTCACAAAAAGCTTTTACCAGTTGCAAGGCTGGAGGAACAAGAAGACATGGAAATCATGGTTGTTAACGAAGAAACACTCGAACCTGTTGAGGATGGTGTTGAAGGAGAAATTTGGGTTTCATCTCCAAGTAACTGTTCTGGTTACCTTGGTCATCCTTCTTTAACAAGGGAAGTTTTTCATGCAAGAATCAGAAACAAAGTTCGTAGGTGTTTCCTACGAACAGGTGACAAAGGAATTGTGAAAGGCGAAAAAAGATATCTCTATGTTACAGGTAGAATTCAAGATACTATAAAGCTTCAAAATGGTGAAAAGATTCAACCACATTACACAGAGACTGCAGTTTTCAACAATTTTCCGAAGCTACTACGAGGAGGTTGTGTTGCAGCATTTAAAGTTTTAGCAACGGTTGTAATTGTTGCAGAGATGCAAAGAGTTGAAAAAGATGTAGATGAGGGGATTCTAAGGAGTGTTTGTGAAGGAATCAAGGAAAGTGTTTTGAAGAAAGAGTGTGTTGATGTTGGATGGGTGGTTTTGGTTAAGAGTGAATGTGTTCCTAAAACTACTTCTGGAAAATTGCAAAGATGGGCTGCTAAAGAGAAGCTTCTAGAAGGAAAAATGGAAATTATGATGGAGATGAGGTTTGGAGAAGATGTTGCGAGGATAAAACACGAGGTAGCCAAAAAAGTGGACGTCCAAAAGAAAGATGATCATATAAATGGTTTGGTTTTTGGTACACAAACTCGTAGCTCATTGATCTCACATCTATGA 1905 0.4026 MQYEYENYDPFFPDQPVVDQYLPVWTRLPSFKSKPAFIWAEDYLNTISTTHLTYGELNTSVDIISTQLLFPLQRDDTVLILCSPGLDLVKVIFGCQRAGLLTVPIIPPHPSFTNEKNYHHLIRVISQTKPKAAIAHPNYISTIHHYITSSHNNKLAHMLQTLLWISTDDLKNSNIHSNLSSDSYNGRKPDELYLVQYTSGATGIPKPVLVTTGSAAHNVRTARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPTSFIKRPRIWLELMSKFNATCTPVPSFTLPLVVKRGGIQKGTLPINLSNLNNLILINEPIYNDSVVEFVHTFSPFGLRASSISPSYGLAENCTFVSTAWRDHNIEAYSSFSHFPTHKKLLPVARLEEQEDMEIMVVNEETLEPVEDGVEGEIWVSSPSNCSGYLGHPSLTREVFHARIRNKVRRCFLRTGDKGIVKGEKRYLYVTGRIQDTIKLQNGEKIQPHYTETAVFNNFPKLLRGGCVAAFKVLATVVIVAEMQRVEKDVDEGILRSVCEGIKESVLKKECVDVGWVVLVKSECVPKTTSGKLQRWAAKEKLLEGKMEIMMEMRFGEDVARIKHEVAKKVDVQKKDDHINGLVFGTQTRSSLISHL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04390 634 Pfam AMP-binding enzyme 31 479 IPR000873 -
Vifa2g04390 634 Gene3D - 474 606 IPR045851 -
Vifa2g04390 634 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 8 590 - -
Vifa2g04390 634 Gene3D - 11 472 IPR042099 -
Vifa2g04390 634 SUPERFAMILY Acetyl-CoA synthetase-like 30 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04390 Vifa-Chr2 1289167351 1289169255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04390 38 477 Monolignol Biosynthesis Gene Families AT5G63380 24.123 2.36e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04390 - - gmx:102666455 911.753