Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g04375 | ATGTCTAAACGCTTCAAGATGAAATTCACAATCCCTTCTCTTCAAATGTGTCGCTCCAATGACCTTTCCTCTCTCCCTGGAAATCCAGTCCCTGCCATATACCGCCTTTCTCCGGTGAACTCCAAAGCACATGACATAGGATATCCAAACATCTCGCCGTCATCTTCACCGGAACACCAATGCAAGGTGTCCTCGAAGATTAATAAAGTTAAAACCAAAGGCCGAAAAAGCACCTCAAGTGTTCCCTCTAAAAAGAGTGAGTTTCTTATTGATAAAATCAATGAAGAAGAAAGTGAAACTTTGATTTCTTGCTTGTCAAGACTCTCCAACGACAACGACGATATCGCGATCCATGATAAAACGGAGAATAAAGATCTAACTAGCAGGAACAGAAGGAGGATAAATAGTGTAAAGAAGGTTGAAAGAGTGAGGTTTCAAAGTACTATAGAGAAACAAAGAGGAGTAGAAACTAAGGTTATGATGAGTAGAATGGAAGAAAAGGTGAAAGAGAGTTTTGCTGTGGTGAAAAAGTCAAAGGATCCTTATGAAGACTTCAAGAAATCAATGATGGAGATGATAGAGGAGATGGAGATGTCTGAAGCCAAGGATTTGGAGCAACTATTGCAGTGTTTTTTGGCTTTGAATTCTAGAGATTATCATGGAGTAATTGTGAGAGCTTTCATGGAGATTTGGCAACAAATGTTTGTTTGGAACCCTAAGTCAAGTAGAAATATTCAAACAAATGTTCAAAGTACGGATATAGAAAAGTAG | 771 | 0.3878 | MSKRFKMKFTIPSLQMCRSNDLSSLPGNPVPAIYRLSPVNSKAHDIGYPNISPSSSPEHQCKVSSKINKVKTKGRKSTSSVPSKKSEFLIDKINEEESETLISCLSRLSNDNDDIAIHDKTENKDLTSRNRRRINSVKKVERVRFQSTIEKQRGVETKVMMSRMEEKVKESFAVVKKSKDPYEDFKKSMMEMIEEMEMSEAKDLEQLLQCFLALNSRDYHGVIVRAFMEIWQQMFVWNPKSSRNIQTNVQSTDIEK | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g04375 | 256 | ProSiteProfiles | OVATE domain profile. | 174 | 233 | IPR006458 | - | |
Vifa2g04375 | 256 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 172 | 234 | IPR006458 | - | |
Vifa2g04375 | 256 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 67 | 235 | IPR038933 | GO:0045892 | |
Vifa2g04375 | 256 | Pfam | Transcriptional repressor, ovate | 178 | 235 | IPR006458 | - | |
Vifa2g04375 | 256 | Coils | Coil | 182 | 202 | - | - | |
Vifa2g04375 | 256 | MobiDBLite | consensus disorder prediction | 50 | 85 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g04375 | Vifa-Chr2 | 1286313488 | 1286314258 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Vifa2g04375 | Ovate | 1.2e-24 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g04375 | - | - | gmx:102662518 | 285.804 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa2g04375 | 2 | 1286313488 | 1286314258 | Vifa2g04375 | 2 | 1286313488 | 1286314258 | ECH |