Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04375 ATGTCTAAACGCTTCAAGATGAAATTCACAATCCCTTCTCTTCAAATGTGTCGCTCCAATGACCTTTCCTCTCTCCCTGGAAATCCAGTCCCTGCCATATACCGCCTTTCTCCGGTGAACTCCAAAGCACATGACATAGGATATCCAAACATCTCGCCGTCATCTTCACCGGAACACCAATGCAAGGTGTCCTCGAAGATTAATAAAGTTAAAACCAAAGGCCGAAAAAGCACCTCAAGTGTTCCCTCTAAAAAGAGTGAGTTTCTTATTGATAAAATCAATGAAGAAGAAAGTGAAACTTTGATTTCTTGCTTGTCAAGACTCTCCAACGACAACGACGATATCGCGATCCATGATAAAACGGAGAATAAAGATCTAACTAGCAGGAACAGAAGGAGGATAAATAGTGTAAAGAAGGTTGAAAGAGTGAGGTTTCAAAGTACTATAGAGAAACAAAGAGGAGTAGAAACTAAGGTTATGATGAGTAGAATGGAAGAAAAGGTGAAAGAGAGTTTTGCTGTGGTGAAAAAGTCAAAGGATCCTTATGAAGACTTCAAGAAATCAATGATGGAGATGATAGAGGAGATGGAGATGTCTGAAGCCAAGGATTTGGAGCAACTATTGCAGTGTTTTTTGGCTTTGAATTCTAGAGATTATCATGGAGTAATTGTGAGAGCTTTCATGGAGATTTGGCAACAAATGTTTGTTTGGAACCCTAAGTCAAGTAGAAATATTCAAACAAATGTTCAAAGTACGGATATAGAAAAGTAG 771 0.3878 MSKRFKMKFTIPSLQMCRSNDLSSLPGNPVPAIYRLSPVNSKAHDIGYPNISPSSSPEHQCKVSSKINKVKTKGRKSTSSVPSKKSEFLIDKINEEESETLISCLSRLSNDNDDIAIHDKTENKDLTSRNRRRINSVKKVERVRFQSTIEKQRGVETKVMMSRMEEKVKESFAVVKKSKDPYEDFKKSMMEMIEEMEMSEAKDLEQLLQCFLALNSRDYHGVIVRAFMEIWQQMFVWNPKSSRNIQTNVQSTDIEK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04375 256 ProSiteProfiles OVATE domain profile. 174 233 IPR006458 -
Vifa2g04375 256 NCBIfam uncharacterized plant-specific domain TIGR01568 172 234 IPR006458 -
Vifa2g04375 256 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 67 235 IPR038933 GO:0045892
Vifa2g04375 256 Pfam Transcriptional repressor, ovate 178 235 IPR006458 -
Vifa2g04375 256 Coils Coil 182 202 - -
Vifa2g04375 256 MobiDBLite consensus disorder prediction 50 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04375 Vifa-Chr2 1286313488 1286314258 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vifa2g04375 Ovate 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04375 - - gmx:102662518 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04375 2 1286313488 1286314258 Vifa2g04375 2 1286313488 1286314258 ECH