Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04347 ATGGCATCATCATCTTCATCCCTTGTCTCCCTATCTTCTACTTTCCTCCAAAAGGACACCCCATTAAAGAGAACAACAACTACAAAATCCCCCATCTCCAAATCTCCTCTCACTCCATTTTCAGTTAATCCAATAAAAGCCACCGTGTCTGTGTCCGAAACTGATACAAAAACAGCGACACTACCAATGCGAGAAATTCCGGGAGATTATGGCCTCCCTTTTATAGGACCCATCAAAGACCGCCAAGATTTTTTCTACAACGAAGGCCAAACCAATTTCTTCAAAAACCGAATCCAAAAATACAACTCAACCGTTTTTCGCGCCAACATGCCACCTGGTCCTTTCATTTCATCTAACCCAAACGTCATCGTTTTACTCGACGGTAAATCCTTCCCTATCCTCTTCGACGTTTCCAAAGTAGAAAAACGAGACCTCTTCACCGGAACATACATGCCTTCAACCAAACTCACCGGCGGTTACCGAATCCTCTCTTACCTCGACCCCTCCGAACCAAAACACGACCAACTCAAACGCTTTCTCTTCTTCCTCCTCAAATCTCGAAGCACCCATTTCATCCCTGAGTTTCATTCATCTTACACAAACCTCTTCGAAACTCTGGAGAAAGAGCTTGCAAAAAAAGGAAAAGCAGCTTTTGCCGATTCCGGCGCACAAACAGCTTTTAACTACCTTGCAAAAGCATTCTACGGAGTTAACCCTACCGAAACAAAACTCGGAACAGATGCTCCGAGTATAATAACTAAATGGACCGCGCTTCAGCTCGCTCCAATTCTTACAATAGGTCTCCCAAGGTTAATCGAGGAACCACTTCTTCACACGTTTCTTCTTCCCCCAGCTTTAGTGAAGAAAGATTACCAGAGACTATATGAGTTTTTCTACGAGTCATCTTCTGGACCGCTTCTGGATGAAGCGGTTCGACTCGGAGTTTCTAAAGAAGAAGCGGTTCACAATCTTATATTCGCCACTTGTTTTAATTCATATGGTGGAATGAACATTTTGTTTCCAAGTATGTTGGGGTTTATCGGAGAAGCGGGGGTTGATCTTCACATTAGATTAGCGGAAGAGATAAGATCGGTTGTTAAATCCAACGGCGGGAAAGTGACTATGGCTGGATTGGAACAAATGCCGTTGACGAAATCAGTGGTCTATGAAACCCTTAGAATTGAACCACCAGTGCCGTTTCAGTACGCGAAAGCAAAACGTGATTTAGTGATAGAGAATCATGAGAATGCGTTTGAAGTGAAGGAAGGTGAAATGCTGTTTGGTTTTCAACCGTTTGCGGCTAAGGATCCTAAGATATTTGATAGGGCGGAGGAGTTTGTTGGGGATAGGTTTATGGGGGAAGGGGAGAAGTTGTTGAAACATGTGCTGTGGTCGAATGGTCCTGAAACGGAACAAACAAATGTTGGGAATAAGCAGTGTGCTGGGAAGGATTTTGTTGTCTTGTTTTCCAGGCTTTTGGTGGTGGAGTTGTTTCTCAGATATGATACTTTTGATGTTGAAGTTAAAAAGGGGGCGGCAGGATCGGCTGTTACCTTTACCTCATTCAAGAAAGCAACCTTTTAG 1584 0.4369 MASSSSSLVSLSSTFLQKDTPLKRTTTTKSPISKSPLTPFSVNPIKATVSVSETDTKTATLPMREIPGDYGLPFIGPIKDRQDFFYNEGQTNFFKNRIQKYNSTVFRANMPPGPFISSNPNVIVLLDGKSFPILFDVSKVEKRDLFTGTYMPSTKLTGGYRILSYLDPSEPKHDQLKRFLFFLLKSRSTHFIPEFHSSYTNLFETLEKELAKKGKAAFADSGAQTAFNYLAKAFYGVNPTETKLGTDAPSIITKWTALQLAPILTIGLPRLIEEPLLHTFLLPPALVKKDYQRLYEFFYESSSGPLLDEAVRLGVSKEEAVHNLIFATCFNSYGGMNILFPSMLGFIGEAGVDLHIRLAEEIRSVVKSNGGKVTMAGLEQMPLTKSVVYETLRIEPPVPFQYAKAKRDLVIENHENAFEVKEGEMLFGFQPFAAKDPKIFDRAEEFVGDRFMGEGEKLLKHVLWSNGPETEQTNVGNKQCAGKDFVVLFSRLLVVELFLRYDTFDVEVKKGAAGSAVTFTSFKKATF 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04347 527 PRINTS E-class P450 group IV signature 434 452 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04347 527 PRINTS E-class P450 group IV signature 480 498 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04347 527 PRINTS E-class P450 group IV signature 381 397 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04347 527 FunFam Allene oxide synthase, chloroplastic 61 527 - -
Vifa2g04347 527 PANTHER CYTOCHROME P450 26 61 502 - -
Vifa2g04347 527 CDD CYP74 95 520 - -
Vifa2g04347 527 Gene3D Cytochrome P450 61 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04347 527 Pfam Cytochrome P450 357 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04347 527 SUPERFAMILY Cytochrome P450 61 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04347 Vifa-Chr2 1278954089 1278955672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04347 25 527 Cytochrome P450 AT5G42650 64.603 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04347 K01723 - gmx:100807192 723.005