Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04328 ATGCAAAAAAAAAATGCCAGCCTTGTCCCAGTGTCATCAACTATTGATGTTATTGAACTAATGAACCTTGGGCACATGAACCGTGCTGTTGGAGCAACAACCCTTAACGACCGCAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGGCATCCGGAGCAACCATCCTCGGATGCATGCATTTGGTTGAATTAGCAGGAAGTGAGAGGGTGGATAAATCAGAGGCTACTGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCCTTATCAGCTTTGGGCGATGTCATACGACAATCCATAATACGGCAACCAGGAAAAGAAAAAGAGATTAACTAG 357 0.4258 MQKKNASLVPVSSTIDVIELMNLGHMNRAVGATTLNDRSSRSHSCLTVHVQGRDLASGATILGCMHLVELAGSERVDKSEATGDRLKEAQHINKSLSALGDVIRQSIIRQPGKEKEIN 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04328 118 Gene3D Kinesin motor domain 1 117 IPR036961 -
Vifa2g04328 118 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 104 IPR027640 GO:0003777|GO:0007018
Vifa2g04328 118 Pfam Kinesin motor domain 5 105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g04328 118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 105 IPR027417 -
Vifa2g04328 118 PRINTS Kinesin heavy chain signature 33 50 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g04328 118 PRINTS Kinesin heavy chain signature 64 82 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g04328 118 SMART kinesin_4 1 115 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa2g04328 118 ProSiteProfiles Kinesin motor domain profile. 1 118 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04328 Vifa-Chr2 1276053699 1276055336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04328 4 103 Calmodulin-binding Proteins AT5G65930 46.000 6.23e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04328 K10406 - gmx:100815713 178.333