Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04327 ATGGATGCCACACACCACATGTTTTGTAACAAAGATCTTGTTAACCCTCTAAACTCAATGGGCATGCAAGTTTCTTGTATTCTTGTTGTTTCACACTTCTTCAATGTTGTCCTTAGAACCGTTGGTCAACCTGGACCCATTGCACAAATTCTGGCTGGGTTGGCGTTAGGTCCAATGTCACATGTTTCTTACATAAAAGAAACATTCTTTCCTGCAAATTCGATGAATTACTACGAAGTGGTTAGTTTCTTCTGTCGAATAAACTTCATGTTTTTATTCGGGTTAGAGATGAATCTCCAATACACAAAACGTCATCTACGTTTAGTAACATTAGTAGCATGTGGTGGTGCAATAATGGGTGCAATATTTGGTTTATCCGTCTCATTTTATTTATATCAAGAGTTAGGTATAAATTCCTCAATGACATATTTTTGCACCATCATTATGTTAGTTGTAGCATACACAAGTTCCCCTATGGTCATCCGTTTGGCAGCAGATTTACGGTTTGCCGCGTCCGATGTAGGCCGGATCGCGGTGTCGGCGGCGTTGATCACAGAAATGGTTTGTTTGTTGTTGTTCAACGTGGTGGTTAATTGGAAGAAACTAAATGATGTTCCTACGAGTTTTTGTTGTATCATTATTACAACGCTAGTGGCTTTTATGAATCGATACTTATCAATTTGGTTTAATGCAAGAGATAAAAACCAAAAATACTTAAAAGCCCCTGAGCTATTGCTTATACTCTTTGTGCTTTTAACTACCTCAATGGTTATAGAAATTTGGGGGTATAATAGTATTATTCATTGTTTTTGCGTTGGATTGTTTTTTCCTAAAGAAGGAAAAACAGCTAGAACATTGCTTCATAAACTTGGTTATTCGATTTATAACTTTATACTTCCGGTGTATTTTGGGTACATGGGGTTACAATGTGACCTTATAAATGTGTTCAAGAGTTTGGATAAGATCACAAATGCAGCTATAATGATATTGTTGAGCATTGGAAGCAAGCTTGGGGGGACTCTCTTGGTTTGTCGGTACCTTCATATTCCTACGAGTGAAGGAATTTTTCTTGGGTTTTTGATGAATACTAGAGGTTATGCTGATCTTCTTTTCATTGGTGCTGCTGCAAAACAAAATCTTGATACAGAATCTTACAATGTGTTGCTAGTAGCAATAGTACTTAACACAGTAATATCAGGAATCATTGTGTCTTTTCTAGCAAGAGGGGAAGAGAGAATGTTTTCACACAATCACACAGCAATTGAGCCACAGAAGCTGGAAGATGAACTTCGAATTTTAGCTTGTGTATACGATCCTCGTCAAGTATCCGCGATACTAGCAACGGTTCTAGCAATACATGGATCAAGAACATCGCCTTCAACGACTTATTTAATGCACTTAATTGAGCTCGTGAAGAAGATCAAGTCCAATTTATTGTACCATGAAAAAGAAAATGGTGACTTTAGCGACGATGATGACTATGGCGGAAACGATGTGGTTGAAATCAACAATTCCTTAGATGCATTCACAGCTGACACAAAGATTCTGGTTCATCAAAAAAGAGCAGTATCTTCTTTTCCAAGTTTGTATGAAGATGTTTGTAATGAAGCTGAAGATCTTCAAGTATCCATCATCCTTCTACCATTTCACAAGCATCAAAGAATTGATGGAAAATTAGAAAGTGGAAAAGAAGGTATAAGGATCACTAATCAAAAGGTTCTTAGGCACGCGCCATGTTCTATCGGCGTTATCATCGAACGAGGACTAACTAAAGTCCCTGGTTTCTCACAATTGGTTTCATCCGAAGGTACACAAAATGTCGCGACACTTTTCTTCGGAGGACCAGACGACCGTGAGGCAATAGCTTGGAGCCTACGTATCTCAAAATGCCCTAAAGTTAACTTAACAATAATAAGATTTCTGTTGTCTTCGTCGTCCTCATCGCATAACGAACATAATGACAACGGAGTACAATTTGACGAAAAGGAAATTCTAATGTCGTTGTCGGGCGAAGAGACAGTGAACGAGATTGACAATACTTTTATGGTTGATTTCTATAATAGATATGTGACTTCAGGACAAATTGGATATGTTGAGAAGTTTGTGAAAGATGGAACACAAACGGTTGAGTCTTTGAAAGAGATTGGAGACATGTACTCTTTGTTTATAGTAGGAAGAGGTGGTAGAGGAAATAGTTCATTAACAATAGGTATGAGTGATTGGGAAGAATGTCCTGAACTTGGAACAGTTGGTGATGTTTTGGCTTCTTCAGATTTTGATATTCATGGTTCTGTTTTAATAATTCAACAACATAGAGATGCTAAGAAGGGTTTAATTCATGATTAA 2346 0.376 MDATHHMFCNKDLVNPLNSMGMQVSCILVVSHFFNVVLRTVGQPGPIAQILAGLALGPMSHVSYIKETFFPANSMNYYEVVSFFCRINFMFLFGLEMNLQYTKRHLRLVTLVACGGAIMGAIFGLSVSFYLYQELGINSSMTYFCTIIMLVVAYTSSPMVIRLAADLRFAASDVGRIAVSAALITEMVCLLLFNVVVNWKKLNDVPTSFCCIIITTLVAFMNRYLSIWFNARDKNQKYLKAPELLLILFVLLTTSMVIEIWGYNSIIHCFCVGLFFPKEGKTARTLLHKLGYSIYNFILPVYFGYMGLQCDLINVFKSLDKITNAAIMILLSIGSKLGGTLLVCRYLHIPTSEGIFLGFLMNTRGYADLLFIGAAAKQNLDTESYNVLLVAIVLNTVISGIIVSFLARGEERMFSHNHTAIEPQKLEDELRILACVYDPRQVSAILATVLAIHGSRTSPSTTYLMHLIELVKKIKSNLLYHEKENGDFSDDDDYGGNDVVEINNSLDAFTADTKILVHQKRAVSSFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSIGVIIERGLTKVPGFSQLVSSEGTQNVATLFFGGPDDREAIAWSLRISKCPKVNLTIIRFLLSSSSSSHNEHNDNGVQFDEKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKDGTQTVESLKEIGDMYSLFIVGRGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIIQQHRDAKKGLIHD 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04327 781 PANTHER CATION/H + ANTIPORTER 15 772 - -
Vifa2g04327 781 Pfam Sodium/hydrogen exchanger family 27 407 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa2g04327 781 Gene3D - 19 415 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04327 Vifa-Chr2 1275863664 1275867277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04327 12 781 Antiporter Super Family AT1G79400 38.254 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04327 K26731 - gmx:100804522 1288.86