Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04297 ATGGCATCATCATTTCTTATCTCAATATCCTCCCCTTTCCTCCAAACTGAATTTCCATTAAAAAGAACTAGAAAACCTCTCACTCGATGCTCCATGTCCGAATGCCCTTTCACTCCACTTTCAGTTGCTCCATTAAAAGCATTTGCGTCCGGCACAGCCGATTCTTCACTATCAATCTCTGTGCCCGACACAGACACAGATACAGATACGACTCCAATAACAAACTCATTGTCTGAAACCAACACAACACTAACCACAGTTCCACAAAAACCAATATCTGAATTTGAAACAACAAAAAAACTCCCACTCCGAAGAATCCCCGGAGACTACGGCCTCCCTTTTGTAGGCCCCATCAAAGACCGTCTAGACTATTTCTACAACGAAGGCCGCGACAAATTCTTCCGAACCCGAATCCATAAATACAAATCAACCGTTTTTCGCGCCAATATGCCACCTGGCCCATTCATTTCAACCAACCCAAACGTCATCGTTTTACTCGACGGCAAATCCTTCCCCATCCTCTTCGACAACTCCAAAGTAGAAAAACGAGACCTCTTCACCGGAACCTTCATGCCTTCAACCGAACTCACCGGCGGTTACCGAATCCTCTCTTACCTCGACCCGTCCGAACCAAAACACGACCAACTCAAACGCTTTCTCTTCTTCCTCCTCAAATCTCGAAGCACCCATTTCATCCCTGAGTTTCGTTCATCCTACACAAAACTCTTCGACACCTTAGAGGACAATCTTGAACAAACGGGAAAAGCGATTTTCGCTGATGTTAACGATCAAGAAGCTTTTAACTACCTTTCAAAAGCATTCTACGGAGTTAACCCTTCCGAAACAAAACTCAAAACCGATGGTCCAAGCATAGTAACAAAATGGACTCTTCTTCAACTAGCTCCAATTCTTACATTAGGTCTTCCTAAATGTATTGAAGAACCACTTCTTCATACTGTTCGTCTTCCACCGGCTTTGGTGAAGAAAGATTACCAGAGACTTTATGAATTTTTCTACCAAGCATCGTCCGGACCGATCTTAGATGAAGCACTTCGACTCGGAGTTTCTAAAGAAGAAGCAGTTCATAACCTTATATTCGCCACTTGTTTTAATACTTTTGGTGGAATGAAGATTTTGTTTCCGAATATGTTGAAGTGGATTGGACGAGCGGGGGTTAATCTTCATGCTAAGTTAGCGAATGAGATTAGATCGGTTGTTAAATCGAATGGCGGGAAAGTCACTATGGCGGGACTGGAGCAAATGCCGTTGATGAAGTCGGTGGTTTATGAGTCGTTTAGAATTGAGCCTCCGGTGCCGTTGCAATACGGGAAAGCGAAACATGATTTTGTGATAGAGAATCATGAGAATGCGTTTGAAGTGAAGGAAGGTGAAATGCTGTTTGGTTTTCAACCGTTTGCGACTAAGGATAGTAAGATATTTGATCGAGCTGATGAGTTTGTTGCGGATAGGTTTGTTGGGGAGGAGGGAGAGAAGTTATTGAAACATGTGCTATGGTCGAATGGTCCTGAAACGGAACAACCTACGGTTGGGAATAAGCAGTGTGCTGGGAAGGATTTTGTTGTCTTGTTTTCTAGGCTTTTGGTGGTGGAGTTGTTTCTCAGATATGATACTTTTGGGATTAATGTTGAGAAGGCGCCTATAGGATCTGCTATTACATTTACCTCTCTTAAGAGAGCAACTTATTAG 1707 0.4312 MASSFLISISSPFLQTEFPLKRTRKPLTRCSMSECPFTPLSVAPLKAFASGTADSSLSISVPDTDTDTDTTPITNSLSETNTTLTTVPQKPISEFETTKKLPLRRIPGDYGLPFVGPIKDRLDYFYNEGRDKFFRTRIHKYKSTVFRANMPPGPFISTNPNVIVLLDGKSFPILFDNSKVEKRDLFTGTFMPSTELTGGYRILSYLDPSEPKHDQLKRFLFFLLKSRSTHFIPEFRSSYTKLFDTLEDNLEQTGKAIFADVNDQEAFNYLSKAFYGVNPSETKLKTDGPSIVTKWTLLQLAPILTLGLPKCIEEPLLHTVRLPPALVKKDYQRLYEFFYQASSGPILDEALRLGVSKEEAVHNLIFATCFNTFGGMKILFPNMLKWIGRAGVNLHAKLANEIRSVVKSNGGKVTMAGLEQMPLMKSVVYESFRIEPPVPLQYGKAKHDFVIENHENAFEVKEGEMLFGFQPFATKDSKIFDRADEFVADRFVGEEGEKLLKHVLWSNGPETEQPTVGNKQCAGKDFVVLFSRLLVVELFLRYDTFGINVEKAPIGSAITFTSLKRATY 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04297 568 Gene3D Cytochrome P450 101 568 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04297 568 SUPERFAMILY Cytochrome P450 101 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g04297 568 PANTHER CYTOCHROME P450 26 100 543 - -
Vifa2g04297 568 CDD CYP74 135 561 - -
Vifa2g04297 568 MobiDBLite consensus disorder prediction 55 78 - -
Vifa2g04297 568 FunFam Allene oxide synthase, chloroplastic 101 568 - -
Vifa2g04297 568 Pfam Cytochrome P450 395 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04297 Vifa-Chr2 1263268981 1263270687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04297 70 568 Cytochrome P450 AT5G42650 65.130 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04297 K01723 - gmx:100807192 737.643