Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04241 ATGGAGTCTGTCGCCTCCAGTTCCAATTCAACACCAAATGACACCAACAACAATAACCGTCGCCGCCACTCTCGTTTCAAACACAGCCAACCAATTTCAGACAGAATAGTAAGAGCTCTCCGCCACCGTCTCCGTCTCCTCCACCGTACCGGCTCCACCTTCTTCATATTCGGCGCAACCGGTAACGTCTACACCGTAACATTATCCTCTACACCCACATGCACGTGCCCCGACCGAACAACCCCATGCAAACACATCATCTTCGTCTTGATTCGAGTACTCGGCGTTTCACAGAACGACGCGTGTGTCCGACGAAGAAACCTACGACCATGTCATCTTCAAAGACTCCTAAACATGCCAACGTTGCCGGAAGCGGTTGCAGGGTTTACGCTACGACAGAGGTTTCATCAGGTGTTTTTCGAAGGAGGGTCGAAGAAGGGGAAGAATAATGTAGAGATGGAAGAAGGTTCGACGTGTCCGGTTTGTCTTGAAGAGATGGGGAAGGAAGAGAAGTTGGTGGCTTGTGGAACATGTAGGAATGTTATTCATGAAGAGTGTTTGGTTAGGTGGAAGAGAAGTAGAGGAAGAAGATCGGCGAGTTGTGTGATTTGTAGGGCAAGGTGGAGGGATAGAGTGGAACAAGATAAGTATGTTAACCTTTCTGCTTATGTTAGTGAGGATGATTTTAGGGCACAATCATCTGGGGGTATTTGTACTGACTAG 723 0.4827 MESVASSSNSTPNDTNNNNRRRHSRFKHSQPISDRIVRALRHRLRLLHRTGSTFFIFGATGNVYTVTLSSTPTCTCPDRTTPCKHIIFVLIRVLGVSQNDACVRRRNLRPCHLQRLLNMPTLPEAVAGFTLRQRFHQVFFEGGSKKGKNNVEMEEGSTCPVCLEEMGKEEKLVACGTCRNVIHEECLVRWKRSRGRRSASCVICRARWRDRVEQDKYVNLSAYVSEDDFRAQSSGGICTD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04241 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 222 IPR013083 -
Vifa2g04241 240 MobiDBLite consensus disorder prediction 1 17 - -
Vifa2g04241 240 Pfam Ring finger domain 158 205 IPR001841 -
Vifa2g04241 240 SUPERFAMILY RING/U-box 150 211 - -
Vifa2g04241 240 ProSiteProfiles Zinc finger SWIM-type profile. 64 94 IPR007527 GO:0008270
Vifa2g04241 240 Pfam SWIM zinc finger 64 92 IPR007527 GO:0008270
Vifa2g04241 240 MobiDBLite consensus disorder prediction 1 28 - -
Vifa2g04241 240 ProSiteProfiles Zinc finger RING-type profile. 159 205 IPR001841 -
Vifa2g04241 240 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 12 214 IPR039903 GO:0061630
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04241 143 215 C3H Transcription Factor Family AT3G58720 31.579 4.91e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04241 - - var:108321788 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04241 2 1245430491 1245431213 Vifa2g04241 2 1245430491 1245431213 ECH