Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04217 ATGATCTCTTCCTTAATGTTACCATCTGCTACAACACTAAGACCTTCTTGTACTTGCAGCATCATTCCCTCATCATCATCATCATCTTCATCTTCACGAAGACTCACTCTCTTTCATCTCCTCACCACCGGTGCCATAGTTCTCCCACCACAATCCCAACTCTTCGGTGCAAAACTATCACAAGCTAATGCTGCTCAAAACTTGTTTGATTGGGTCCAAAATGATGATAGAAGATTCCTACATGTTGTTTACGGTGTTGCAGATTTGGACAAGACCATAAAATTCTACACTGAATGTCTTGGCATGAAGCTTTTGAGAAAACGCGATATACAGGAAGATAAATATTCAAATGCTTTTCTTGGATATGGATCTGAAGATTCTAATTTTACAGTTGAACTTACTTATAATTATGGAGTAGATAACTATGATATTGGAACTGGTTTTGGTCATTTTGGTATTGTAGCTCAAGATGTTGCCAAGACAGTGGATATTGTTAAGGCAAAAGGGGGAAAGGTTACGAGGGAGCCGGGGCGTGTTAAAGGCGGCTCTATCGTTACTGCTTCTGTTGAAGATCCTAGTGGCTATAGGTTTGAGCTTTTGGAGAGAAGACTTACTCGCGAACCGTTGTGCCAAGTGATGCTTCGAGTAGGCGATCTTGATCGTGTCATAGCCTTTTATGAAAAAGCTGTTGGCATGAAACTTCTCCACAAGATAGACAACCCTGAGGATAAGAACACAGTAGCCGTGTTGGGATACGGTCCTGAAGCTAATAGTCCAGTTCTAGAACTGACGTATAACTACGGTGTCACTAATTATGACAAAGGAAATGGTTATACACAGATCGCAATAGGCACGAATGATGTATATAAGACTGCAGAAGCGATCAAGTTATATGGAGGGAAGATTATTCGTGAACCTGGACCCTTACCAGGTATCAACACCAAGATTGCAGTTTGCTTAGACCCTGATGGTTGGAAATTGGTATTTGTTGATAATGTCGATTTTCTGAAGGAATTAGAGTGA 1023 0.4086 MISSLMLPSATTLRPSCTCSIIPSSSSSSSSSRRLTLFHLLTTGAIVLPPQSQLFGAKLSQANAAQNLFDWVQNDDRRFLHVVYGVADLDKTIKFYTECLGMKLLRKRDIQEDKYSNAFLGYGSEDSNFTVELTYNYGVDNYDIGTGFGHFGIVAQDVAKTVDIVKAKGGKVTREPGRVKGGSIVTASVEDPSGYRFELLERRLTREPLCQVMLRVGDLDRVIAFYEKAVGMKLLHKIDNPEDKNTVAVLGYGPEANSPVLELTYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLYGGKIIREPGPLPGINTKIAVCLDPDGWKLVFVDNVDFLKELE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04217 340 FunFam Lactoylglutathione lyase 205 340 - -
Vifa2g04217 340 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 211 328 IPR004360 -
Vifa2g04217 340 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 79 199 IPR004360 -
Vifa2g04217 340 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 78 202 IPR037523 -
Vifa2g04217 340 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 208 332 IPR037523 -
Vifa2g04217 340 Gene3D - 205 340 IPR029068 -
Vifa2g04217 340 ProSitePatterns Glyoxalase I signature 1. 81 102 IPR018146 GO:0004462|GO:0046872
Vifa2g04217 340 PANTHER LACTOYLGLUTATHIONE LYASE 59 340 - -
Vifa2g04217 340 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 77 202 IPR029068 -
Vifa2g04217 340 NCBIfam lactoylglutathione lyase 79 203 IPR004361 GO:0004462|GO:0046872
Vifa2g04217 340 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 209 332 IPR029068 -
Vifa2g04217 340 Gene3D - 54 203 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04217 Vifa-Chr2 1237287631 1237289528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04217 209 331 Calmodulin-binding Proteins AT1G08110 27.027 1.63e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04217 K01759 - gmx:100810908 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04217 2 1237287631 1237289528 Vifa2g04217 2 1237287631 1237289528 ECH