Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04216 ATGATCTCTTCCTTAATGTTACCATCTGCTACAACACTAAGACCTTCTTGTACTTGCAGCATCATTCCCTCATCATCATCATCATCTTCATCTTCACGAAGACTCACTCTCTTTCATCTCCTCACCACCGGTGCCATAGTTTTCTGGTGCTGCTGCTGCATTTGGTTATTCCTTTCCTTATTAGTTCTCCCACCACAATCCCAACTCTTCGGTGCAAAACTATCACAAGCTAATGCTGCTCAAAACTTGTTTGATTGGGTCCAAAATGATGATAGAAGATTCCTACATGTTGTTTACGGTGTTGCAGATTTGGACAAGACCATAAAATTCTACACTGAATGTCTTGGCATGAAGCTTTTGAGAAAACGCGATATACAGGAAGATAAATATTCAAATGCTTTTCTTGGATATGGATCTGAAGATTCTAATTTTACAGTTGAACTTACTTATAATTATGGAGTAGATAACTATGATATTGGAACTGGTTTTGGTCATTTTGGTATTGTAGCTCAAGATGTTGCCAAGACAGTGGATATTGTTAAGGCAAAAGGGGGAAAGGTTACGAGGGAGCCGGGGCGTGTTAAAGGCGGCTCTATCGTTACTGCTTCTGTTGAAGATCCTAGTGGCTATAGGTTTGAGCTTTTGGAGAGAAGACTTACTCGCGAACCGTTGTGCCAAGTGATGCTTCGAGTAGGCGATCTTGATCGTGTCATAGCCTTTTATGAAAAAGCTGTTGGCATGAAACTTCTCCACAAGATAGACAACCCTGAGGATAAGAACACAGTAGCCGTGTTGGGATACGGTCCTGAAGCTAATAGTCCAGTTCTAGAACTGACGTATAACTACGGTGTCACTAATTATGACAAAGGAAATGGTTATACACAGATCGCAATAGGCACGAATGATGTATATAAGACTGCAGAAGCGATCAAGTTATATGGAGGGAAGATTATTCGTGAACCTGGACCCTTACCAGGTATCAACACCAAGATTGCAGTTTGCTTAGACCCTGATGGTTGGAAATTGGTATTTGTTGATAATGTCGATTTTCTGAAGGAATTAGAGTGA 1068 0.4082 MISSLMLPSATTLRPSCTCSIIPSSSSSSSSSRRLTLFHLLTTGAIVFWCCCCIWLFLSLLVLPPQSQLFGAKLSQANAAQNLFDWVQNDDRRFLHVVYGVADLDKTIKFYTECLGMKLLRKRDIQEDKYSNAFLGYGSEDSNFTVELTYNYGVDNYDIGTGFGHFGIVAQDVAKTVDIVKAKGGKVTREPGRVKGGSIVTASVEDPSGYRFELLERRLTREPLCQVMLRVGDLDRVIAFYEKAVGMKLLHKIDNPEDKNTVAVLGYGPEANSPVLELTYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLYGGKIIREPGPLPGINTKIAVCLDPDGWKLVFVDNVDFLKELE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04216 355 Gene3D - 69 218 IPR029068 -
Vifa2g04216 355 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 92 217 IPR029068 -
Vifa2g04216 355 PANTHER LACTOYLGLUTATHIONE LYASE 75 355 - -
Vifa2g04216 355 FunFam Lactoylglutathione lyase 220 355 - -
Vifa2g04216 355 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 224 347 IPR029068 -
Vifa2g04216 355 ProSitePatterns Glyoxalase I signature 1. 96 117 IPR018146 GO:0004462|GO:0046872
Vifa2g04216 355 NCBIfam lactoylglutathione lyase 94 218 IPR004361 GO:0004462|GO:0046872
Vifa2g04216 355 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 93 217 IPR037523 -
Vifa2g04216 355 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 226 343 IPR004360 -
Vifa2g04216 355 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 94 214 IPR004360 -
Vifa2g04216 355 Gene3D - 220 355 IPR029068 -
Vifa2g04216 355 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 223 347 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04216 Vifa-Chr2 1237287631 1237289528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04216 224 346 Calmodulin-binding Proteins AT1G08110 27.027 1.80e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04216 K01759 - gmx:100810908 493.041